Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3857 ATGTTAGAGAGAGTGAAAGAGTTTAACATGGACAAAGTTATTGAAGAATTCGAGTTGATGACTAAAGATGCAGAAAGGGTTCAGAGGGAAACACTCAAAAGAATTTTGGAAGTTAATGCATCAGCTGAATATTTGCAGAATTTTGGTCTTGATGGAAGAACTGATCTTGAGAGTTTCAAGTCTTGTATTCCACTAGCTACTCACAAAGACTTGGAACCTTTTATCAATAGAATTCTTGATGGTGATGATTCTCCTATTCTCACTGGAAAACCTATTACCACTATGTCTTTAAGTTCTGGCACTACGCAAGGGAAGCCAAAATATATACCATGGAATGATGAATTGTTTGAAACTACGATGCAGATATATCGGACCTCTTTTGCCTATAGGAACAGAGAGTTTCCTATAAAAAATGGGAAGGCTTTAAACTTCATATACGGTAGCAAACAGTTCAAAACAAAAGGGGGTCTCATAGCTACAACTGCTACAAGCAACGTGTTTCGCAATCCATCTTACAAACATGCAATGAAGGCACTTAAATCGCAATGTTGCAGTCCAGATGAAGTGATATTTGGTGGTGATTTTTTCCAATCATTATATTGTCATCTATTATGCGGACTAATTTTCCGCGAGGAGGTTCAATTGGTATGTTCAACATTTGCACATAGCATTGTTCATGCCTTCAGATCCTTTGAACAAGTTTGGGAAGAGCTTTGTAATGATATAAGAGAAGGTGTTCTTAGTAGCAGAGTCACGGTTCCCTCCATTCGAACTGCTATGTCTAAATTGCTCAAACCAAATCCAGAATTAGCGAACATAATCCACAAAAGATGTATAGGATTAAGCAACTGGTATGGTTTGATACCGGAGCTTTTTCCGAATGCAAAGTACATTTATGGCATTATGACAGGTTCTATGGAACCATATTTGGTAAAACTGAGGCACTATGCAGGGGTGCTACCTTTGTGTACTGCTGACTATGGAGCTTCTGAAGGGTGGATTGCTGCAAATGTTAACCCAAAAATTCCACCTGAATTGGCAACTTACGCCGTGCTTCCTCAAATTGGTTACTTTGAGTTCATTCCTCTCACACAGCTTGAGAATGAAAATACTTTCCTTTGTGTTAATCCTCAGCCAGTGGGACTCACTGAGGTTAAAGTTGGTGAAGAGTATGAAATTGTTATGACCACTCCAACAGGTTTATACAGGTATAGGCTAGGGGATGTGGTAAAAGTTATGGGATTCCATAACTCAACTCCAGAACTAAAGTTTATTCGTAGGAGTAGTCTTCTGCTAAACATAAACATTGACAAGAACACAGAGAAAGATTTACAGTTAGCCGTGGAAGCAGCGGCAAAATTATTAGTAGAAGAGAAATTGGAAGTTGTTGAGTTCACAAGCCATGTTGATTTATCCAAAGAGCCAGGGAACTATGTAATCTTCTGGGAAATCAACGGGGAAGCAAGTGAAGAAGTGCTTCATGAATGTTGCAACTGTTTGGACAAGTCTTTTGTCGATGCAGGCTACACTAGTTCTCGTAAAGTCAACGCTATTGGAGCCTTAGAACTTCGAGTTGTTAGGAAAGGAACATTTCAAAAGATTCTTGATCATTACCTTGGATTAGGAACAGCTGTTAGTCAGTATAAAACACCAAGATGTGTAGGTCCTACACACAACATTGTGTTGCAAATATTGAGTGAAAATGTTGTCAAGAGCTATCACAGTACTGCATTCAATTGA 1740 0.3879 MLERVKEFNMDKVIEEFELMTKDAERVQRETLKRILEVNASAEYLQNFGLDGRTDLESFKSCIPLATHKDLEPFINRILDGDDSPILTGKPITTMSLSSGTTQGKPKYIPWNDELFETTMQIYRTSFAYRNREFPIKNGKALNFIYGSKQFKTKGGLIATTATSNVFRNPSYKHAMKALKSQCCSPDEVIFGGDFFQSLYCHLLCGLIFREEVQLVCSTFAHSIVHAFRSFEQVWEELCNDIREGVLSSRVTVPSIRTAMSKLLKPNPELANIIHKRCIGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLVKLRHYAGVLPLCTADYGASEGWIAANVNPKIPPELATYAVLPQIGYFEFIPLTQLENENTFLCVNPQPVGLTEVKVGEEYEIVMTTPTGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAAKLLVEEKLEVVEFTSHVDLSKEPGNYVIFWEINGEASEEVLHECCNCLDKSFVDAGYTSSRKVNAIGALELRVVRKGTFQKILDHYLGLGTAVSQYKTPRCVGPTHNIVLQILSENVVKSYHSTAFN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3857 579 Pfam GH3 auxin-responsive promoter 16 554 IPR004993 -
Mtr7g3857 579 Coils Coil 10 30 - -
Mtr7g3857 579 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 579 IPR004993 -
Mtr7g3857 579 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3857 Mtr-Chr7 55404906 55410501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3857 12 576 EF-hand Containing Proteins AT1G23160 38.276 4.10e-132 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3857 K14506 - gmx:100794598 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3857 7 55404906 55410501 Mtr7g3857 7 55404906 55410501 ECH
Mtr7g3857 7 55404906 55410501 Mtr8g0835 8 10327126 10331185 PCT