Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0769 ATGGTCCAGGGTGAGAAGAAGCAAGAAAATGGACACAAGAAAATAGATTATGATATGGAAGAGAAAATAGATTATGTGTTTAAGGTTGTTGTCATTGGTGACTCAGCAGTAGGAAAGACTCAAATACTATCAAGGTTTTCAAAGAATGAGTTTTGCTTTGACTCAAAGTCAACTATTGGTGTTGAATTTCAAACTAGGACTGTCACTATTAATGGTAAAGTAATTAAAGCTCAGATCTGGGATACTGCTGGCCAAGAAAGGTACAGAGCTGTAACAAGTGCATACTATAGAGGTGCATTAGGAGCAATGCTAGTATATGACATAACCAAAAGGCAATCTTTTGATCATGTTGCTAAATGGGTTGAGGAACTTAGAGCACATGCAGATAACTCAATTGTGATCATGCTAGTTGGTAACAAAGGTGACCTTGTTGATTTGAGAATGGTCCCTACTGAAGATGCAGTTGAGTTTGCAGAAGACCAAGGTTTATTCTTCTCAGAGACTTCAGCTCTTACTGGTGTGAATGTGGAGGGTGCATTTATGAAATTGCTAGAAGAGATTAATAGTGTAGTTTCTAAAAAGGCATTGGAATGTGGTAATGTGAAGGGGATTGCACTAAAAGGGTCTAAGATTGATGTAATTTCAGGTGCTGAATTGGAAATTAGTGAGATAAAGAAGTTGTCTTCATGCTCTTGTTGA 699 0.3748 MVQGEKKQENGHKKIDYDMEEKIDYVFKVVVIGDSAVGKTQILSRFSKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLVGNKGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKALECGNVKGIALKGSKIDVISGAELEISEIKKLSSCSC* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0769 232 Gene3D - 19 227 IPR027417 -
Mtr8g0769 232 ProSiteProfiles small GTPase Rho family profile. 20 199 - -
Mtr8g0769 232 ProSiteProfiles small GTPase Rab1 family profile. 22 230 - -
Mtr8g0769 232 SMART ras_sub_4 24 190 - -
Mtr8g0769 232 SMART rab_sub_5 27 190 - -
Mtr8g0769 232 Pfam Ras family 28 188 IPR001806 GO:0003924|GO:0005525
Mtr8g0769 232 CDD Rab11_like 24 187 - -
Mtr8g0769 232 PANTHER - 8 232 - -
Mtr8g0769 232 PANTHER RAS-RELATED PROTEIN RABA3 8 232 - -
Mtr8g0769 232 SMART ran_sub_2 32 227 - -
Mtr8g0769 232 SMART rho_sub_3 29 193 IPR001806 GO:0003924|GO:0005525
Mtr8g0769 232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 191 IPR027417 -
Mtr8g0769 232 TIGRFAM small_GTP: small GTP-binding protein domain 26 181 IPR005225 GO:0005525
Mtr8g0769 232 PRINTS Transforming protein P21 ras signature 27 48 - -
Mtr8g0769 232 PRINTS Transforming protein P21 ras signature 50 66 - -
Mtr8g0769 232 PRINTS Transforming protein P21 ras signature 68 90 - -
Mtr8g0769 232 PRINTS Transforming protein P21 ras signature 130 143 - -
Mtr8g0769 232 PRINTS Transforming protein P21 ras signature 165 187 - -
Mtr8g0769 232 ProSiteProfiles small GTPase Ras family profile. 21 232 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0769 Mtr-Chr8 9516857 9518876 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0769 K07904 - gmx:100799439 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0769 8 9516857 9518876 Mtr8g0769 8 9516857 9518876 ECH
Mtr7g3897 7 55758641 55760088 Mtr8g0769 8 9516857 9518876 PCT