Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0476 ATGACAAACAATACCACCATCCACCCTCAAGCCAAAACCACCACCAACGGTGGTGCAGCCACCGCCGTTAAACCCTCATTCCCGGCGACAAAAGCGCAAATCTACGGCGCCACCCGCCCAACCTACCGTCCACAAACCCACCGTCACCGTAACAACCGTAACTGGTGTTGCACCATTTGTTGCTGGCTTCTTCTCATCCTCATCTTCGTCCTCATCCTCCTCGGCGTCGCTGGCACCGTCGTCTACTTCCTCTACCATCCCCAACGTCCTTCCTTCACCGTCACCTCCCTTAAACTCACCTCCTCTGAATTTGACCTAACTCTTTCCACCACAAACCCTAACGAGAAAATAACATTTTCTTACCAACCCATCTCAGTTTCTCTTCTAGCCGGTGAACTCGACGTTGGTGACGGTGTTATTCCGTCGTTTGAGCATGGAACGAAGAATACTACGATGTTGAAAGCTTTGGTTGAGAGAAAGAGTGTGAAGAGGAAGTCATTGGAGTTGAAGATGAAGATGGAGACTAAGGTGGAGGCTAAGATGTGGGTTTTCAAGACTCCACATGTTGGAATAAATGTGCTTTGTGACGGTATCGATGTCGCCGGCGAGAAAGTGACGACGGCGGATGAGAAGTGTGCGGTGGATGTGAGGTTCAAGGTCTGGAAATGGACTCTTGGATGA 681 0.5022 MTNNTTIHPQAKTTTNGGAATAVKPSFPATKAQIYGATRPTYRPQTHRHRNNRNWCCTICCWLLLILIFVLILLGVAGTVVYFLYHPQRPSFTVTSLKLTSSEFDLTLSTTNPNEKITFSYQPISVSLLAGELDVGDGVIPSFEHGTKNTTMLKALVERKSVKRKSLELKMKMETKVEAKMWVFKTPHVGINVLCDGIDVAGEKVTTADEKCAVDVRFKVWKWTLG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0476 226 SUPERFAMILY LEA14-like 71 157 - -
Mtr8g0476 226 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 224 - -
Mtr8g0476 226 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g0476 226 Pfam Late embryogenesis abundant protein 107 193 IPR004864 -
Mtr8g0476 226 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 6 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0476 Mtr-Chr8 5504167 5505233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0476 31 181 EF-hand Containing Proteins AT5G21130 26.061 9.96e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0476 - - mtr:MTR_8g016370 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3494 2 49068733 49069515 Mtr8g0476 8 5504167 5505233 PCT