Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3494 ATGGCAGATCGTGTATATCCCGCCGCCAAACCCATAACCAACGGCAACGGAAACGGTAACGGTGTCTCCGCCGCAAACCCATCATTTCCAGCCACAAAAGCTCAACTCTACGGTGCCACCCGCCCTACCTACCGTCCTCAACCTCACCACCGCCGTACCCGCCGCCGTTGCTGCTGCACCTTCTTCTTCTGGTTTTTCCTCATACTTCTCATCCTCCTCCTCCTCCTCGGCGTAACCGGCACCGCTTTCTACCTCATCTACCGTCCCCACCGTCCTTCCTTCACCGTCACATCTCTCAAACTTTCCTACCTCAACCTCACCTCCTCCTCCACCCTCAACTCAAAGTTCAACGTCAACATCACTGCAAAAAACCCTAACAAACATATCACCTTCGTTTACCAACCAACCACCATCACAATTCTCTCTAACAACATCAACATCGGTGAAGGAACCATACCATCTTTCAAACATGGCAAGAAGAACACTACTCTTCTAAAATCTTCCATTTCGAGTACTGGTCTAGCATTAGAATCAGAAGCTTCCACGGAGCTGAAGAAGAACATGAAGAGCAAAAACGGTTTAGCGTTGAAAGTGAAGTTGGATACAAAAGTGAAGGCTAAAATGGGAAAAATGAAAACACCTAACGTTGGAATAAGAGTTACATGTGACGGTGTTAGAGTTCATGTTCCTGTCGTCGGTAGTAAGAAACCAGTAACGGCGTCAACTTCGAACGTTAAGTGTGATGTTGATGTTAGGTTTAAGATCTGGAAATGGACCGTTTAA 783 0.4713 MADRVYPAAKPITNGNGNGNGVSAANPSFPATKAQLYGATRPTYRPQPHHRRTRRRCCCTFFFWFFLILLILLLLLGVTGTAFYLIYRPHRPSFTVTSLKLSYLNLTSSSTLNSKFNVNITAKNPNKHITFVYQPTTITILSNNINIGEGTIPSFKHGKKNTTLLKSSISSTGLALESEASTELKKNMKSKNGLALKVKLDTKVKAKMGKMKTPNVGIRVTCDGVRVHVPVVGSKKPVTASTSNVKCDVDVRFKIWKWTV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3494 260 PANTHER OS05G0199100 PROTEIN 1 259 - -
Mtr2g3494 260 SUPERFAMILY LEA14-like 72 214 - -
Mtr2g3494 260 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 259 - -
Mtr2g3494 260 Coils Coil 260 260 - -
Mtr2g3494 260 Pfam Late embryogenesis abundant protein 120 222 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3494 Mtr-Chr2 49068733 49069515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3494 50 222 EF-hand Containing Proteins AT5G21130 26.437 3.83e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3494 - - mtr:MTR_2g100060 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3494 2 49068733 49069515 Mtr8g0476 8 5504167 5505233 PCT