Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0433 ATGTCTTCTTCCTTCAAATTCATATGTTACCATTTTTTCATCATCATATTACATGTCTTTGCTGCAACACAAATTTTGTCATCATCAACACATAATTCCTCATTCAACAATTTTCTAGACAGTGCCAAAAATCCTGAGGTTTATGATTGGATGATCAATATCAGAAGGAAAATTCATGAGAATCCAGAATTGGGTTATGAGGAATTTGAGACAAGTGAATTGATAAGAACAGAATTGGATAAACTGAGTATTCCCTATAAATATCCAGTTGCAATCACTGGTGTCATTGGTTTCATAGGAACTGGATTGTCTCCTTTTGTTGCTTTAAGAGCTGATATGGATGCTCTTTCTATGCAGGAAATGGTGGAGTGGGAGCACAGGAGTAAGGTACCTGGAAAGATGCATGCGTGTGGTCATGATGCTCATGTTACCATGCTACTTGGTGCTGCAAAGATTCTCAAGCAGCATGAAAAAGAGATACAGGGAACCATTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGCGGAGGGGCTAAGAAAATTTTAGATGCCGGGGCATTAGAAAATGTCACTGCTATCTTTGGATTGCATATTGTTCCTGACTTACCAATTGGTGAAGTGTCCTCCAGGTCTGGTCCAATATTGGCAGGAAGTGGATTCTTTGAAGCAAAAATAAGTGGAAAGGGAGGTCATGCAGCTATTCCTCAACAATCTATAGATCCCATATTAGCAGCTTCTGGTGCGATTATTAGCCTACAGCACCTTGTTTCTCGCGAGGCTGATCCTTTAGACTCCCAGGTTGTGACGATTGCAAAGATCCAAGGAGGTAGTGCATTCAATGTTATTCCAGATCATGTCACAATTGGTGGTACCTTCCGAGCCTTTTCTAAAGAAAGCTTCAACCAACTGAGACAGCGGATTGAGGAGGTTATCATTGGGCAAGCTGCTGTGCATAGGTGCAATGCAACTGTGGACTTCCTTCATGGAGTGAAACCTTTTTATCCTCCAACTGTAAACAATGCTGACCTGCATGAACATTTTGTGAATGTTGCGGTGAATATGCTTGGCATCGATAAAGTTGATAGTGTCATGACACCATATATGGGATCCGAAGACTTTTCATTCTATCAAGAGGTCATACCTGGATACTTCTTCATGCTTGGAGTGAAGAATGCTTCACACAAACGGTTCGAGTCTTTATTACACTCACCTTATCTCGAAATCAATGAAGATGGTCTCCCTTATGGAGCTGCACTTCATGCATCTTTAGCTGCTAGTTATCTTCTAAAACATCAGCGGGATACTGTACCTGGTGTTGAGAGAAAATATCATGATGAACTATAA 1344 0.4092 MSSSFKFICYHFFIIILHVFAATQILSSSTHNSSFNNFLDSAKNPEVYDWMINIRRKIHENPELGYEEFETSELIRTELDKLSIPYKYPVAITGVIGFIGTGLSPFVALRADMDALSMQEMVEWEHRSKVPGKMHACGHDAHVTMLLGAAKILKQHEKEIQGTIVLVFQPAEEGGGGAKKILDAGALENVTAIFGLHIVPDLPIGEVSSRSGPILAGSGFFEAKISGKGGHAAIPQQSIDPILAASGAIISLQHLVSREADPLDSQVVTIAKIQGGSAFNVIPDHVTIGGTFRAFSKESFNQLRQRIEEVIIGQAAVHRCNATVDFLHGVKPFYPPTVNNADLHEHFVNVAVNMLGIDKVDSVMTPYMGSEDFSFYQEVIPGYFFMLGVKNASHKRFESLLHSPYLEINEDGLPYGAALHASLAASYLLKHQRDTVPGVERKYHDEL* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0433 447 Pfam Peptidase dimerisation domain 217 311 IPR011650 -
Mtr8g0433 447 CDD M20_IAA_Hyd 51 416 IPR044757 GO:0009850|GO:0016787
Mtr8g0433 447 PANTHER PEPTIDASE M20 FAMILY MEMBER 11 447 IPR017439 GO:0016787
Mtr8g0433 447 Gene3D Zn peptidases 51 412 - -
Mtr8g0433 447 SUPERFAMILY Zn-dependent exopeptidases 46 430 - -
Mtr8g0433 447 PIRSF Amidohydrol_AmhX 38 432 IPR017439 GO:0016787
Mtr8g0433 447 PANTHER AUXIN CONJUGATE HYDROLASE 11 447 - -
Mtr8g0433 447 SUPERFAMILY Bacterial exopeptidase dimerisation domain 216 335 IPR036264 -
Mtr8g0433 447 TIGRFAM amidohydrolases: amidohydrolase 51 415 IPR017439 GO:0016787
Mtr8g0433 447 Gene3D - 216 334 - -
Mtr8g0433 447 Pfam Peptidase family M20/M25/M40 108 424 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0433 Mtr-Chr8 5047301 5052677 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0433 K21604 K14664 gmx:100789077 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0433 8 5047301 5052677 Mtr8g0433 8 5047301 5052677 ECH
Mtr2g3527 2 49317498 49322056 Mtr8g0433 8 5047301 5052677 PCT