Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3527 ATGGGTCTCTTCAAATGGGTCAACTTCTTCACCATCATCATTTTCATTTTCTTTTTCTCTGCAACACCAGTCTTCTCAGACTTCTCTTCCACTTCAAATGACCACTTATCAATCCCAAACTTTCTAGATTTAGCTAAAGAGCCTAAAGTTTTTGACTGGATGGTTTCTATAAGGAGAAAAATTCATGAGAATCCTGAACTGAGTTATCAAGAATTTGAGACTAGTAAGCTTATAAGAACAAAATTGGATGAGTTGGGTGTTCAATATAAACATCCAGTTGCAGTTACAGGTGTTATTGGTTACATAGGAACTGGTCTTCCTCCTTTTGTTGCTCTTAGAGCTGATATGGATGCTCTTCTTATTCAGGAAATGGTGGAGTGGGAGCATAAAAGTAAAGTACCTGGAAAGATGCATGCATGTGGTCATGATGCTCATGTTGCTATGCTTCTTGGTGCTGCTAAGATTCTCAAGGACCGTGAAAAACATTTACATGGAACAATAGTTCTTGTTTTTCAACCAGCAGAAGAAGGAGGTGGTGGGGCTAAAAAAATTTTAGATGCTGGTGCCTTGGAAAAAGTCTCTGCCATATTTGGATTGCATGTCCTAAATAACTTACCTCTAGGTGAAGTGGCTTCTAGGTCCGGTCCTATATTTGCAGGAAATGGCTTCTTTAAAGCAGTAATAAGCGGCAGGGGAGGCCATGCAGCCATTCCTCAACATTCTATAGACCCTATATTGGCAACTTCCAATGTGATTGTTAGCTTACAACAAATTGTTTCTCGCGAGATTGATCCCCTCGACTCTCAGGTTTTGACTGTAGCAATGATTCAAGGAGGTGGTGCATTCAATGTTATTCCAGACTCTGTCACAATTGGTGGCACTTTCCGAGCTTTTTCAAACGAAAGCTTCACACAACTGAGACACCGCATTGAGCAGATTATCACTGGACAAGCTGCTGTGCAGAGATGCCATGCAACAGTCAGCTTCCTTGAAGAAGAGAAGCCTTTCTTCCCTCCAACTGTAAACGATGGTGGCTTGCATGACTATTTTCAAAGTGTCGCCGGGAGTTTGCTCGGTGCTGATAAAGTTAAAGGCATGCAACCAATGATGGGATCAGAAGACTTTGCATTCTATCAAGAGGCTATTCCTGGATACATCTTCCTCCTCGGAATGGAAGATGTCTCAGTTGAACGTCTTCCGTCGGGACACTCACCCTATTTCAAAGTCAACGAAGATGTACTTCCTTACGGCGCTGCACTTCATGCATCCTTGGCTTCTAGGTATTTGCTCAAATTGCGTCAGGAGGTACCAATAGTAGAGGGGAAATATCATGATGAATTATAG 1344 0.4204 MGLFKWVNFFTIIIFIFFFSATPVFSDFSSTSNDHLSIPNFLDLAKEPKVFDWMVSIRRKIHENPELSYQEFETSKLIRTKLDELGVQYKHPVAVTGVIGYIGTGLPPFVALRADMDALLIQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKDREKHLHGTIVLVFQPAEEGGGGAKKILDAGALEKVSAIFGLHVLNNLPLGEVASRSGPIFAGNGFFKAVISGRGGHAAIPQHSIDPILATSNVIVSLQQIVSREIDPLDSQVLTVAMIQGGGAFNVIPDSVTIGGTFRAFSNESFTQLRHRIEQIITGQAAVQRCHATVSFLEEEKPFFPPTVNDGGLHDYFQSVAGSLLGADKVKGMQPMMGSEDFAFYQEAIPGYIFLLGMEDVSVERLPSGHSPYFKVNEDVLPYGAALHASLASRYLLKLRQEVPIVEGKYHDEL* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3527 447 PIRSF Amidohydrol_AmhX 42 433 IPR017439 GO:0016787
Mtr2g3527 447 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 447 IPR017439 GO:0016787
Mtr2g3527 447 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 4 1 447 - -
Mtr2g3527 447 Pfam Peptidase dimerisation domain 224 317 IPR011650 -
Mtr2g3527 447 CDD M20_IAA_Hyd 54 429 IPR044757 GO:0009850|GO:0016787
Mtr2g3527 447 SUPERFAMILY Zn-dependent exopeptidases 49 429 - -
Mtr2g3527 447 SUPERFAMILY Bacterial exopeptidase dimerisation domain 219 338 IPR036264 -
Mtr2g3527 447 Gene3D Zn peptidases 54 414 - -
Mtr2g3527 447 Gene3D - 219 337 - -
Mtr2g3527 447 TIGRFAM amidohydrolases: amidohydrolase 54 416 IPR017439 GO:0016787
Mtr2g3527 447 Pfam Peptidase family M20/M25/M40 111 425 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3527 Mtr-Chr2 49317498 49322056 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3527 K21604 - mtr:MTR_2g100560 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3527 2 49317498 49322056 Mtr8g0433 8 5047301 5052677 PCT