Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0385 ATGGATAGTAATTTAAGTAGAAGTATAAGTAGAAGCTTGAGTAGGTCAAGTTGGAAAATGGAAGAAGTGTTTGCTAGTGGAAGATATTCAAGAAGAACTTCTCAAGTTGATGAAGATGAAGAAGCTCTTAAATGGGCTGCAATTGAGAAACTACCAACCTATGATAGGTTAAGAACAAGTATTATGCAAACTTTTACTGAGGGTGATCAACCTCAGCCAGGAAACAGGCAGCAACACAAGGAAGTTGATGTTACCAAATTGGATATGAATGAAAGACAACAAATTATTGACAAAATTTTCAAGGTTGCTGAAGAAGATAATGAAAAGTACCTTAGGAAATTCAGAAACAGAATTGACAAGGTTGGAATAAGACTTCCAACAGTAGAAGTGAGGTTTAAGAATTTGACTGTTGAAGCTGATTCCTTTGTTGGCAGCAGAGCTTTGCCAACTTTACCAAATACTGCACTAAACATTCTTGAATCACTTATTGGCCTGTTTGGATTTAATACAACTAAGAGAACAAAACTCACAATTCTTAAAAATGCTTCTGGCATTGTTAAACCATCAAGGATGGCCCTATTGTTAGGTCCCCCTTCTTCAGGGAAAACGACCCTATTGCTGGCATTGGCTGGAAAATTGGACTCTGAATTGAGGGTACAAGGAGATATTACATACAATGGACATAGACTTAATGAGTTTGTACCAAGAAAGACTTCAGCATATATTAGTCAAAATGATGTTCATGTTGGAGAAATGACTGTAAAAGAAACCTTAGATTTTTCAGCTAGATGCCAAGGAGTTGGAACTAGATATGATCTACTAAGTGAGCTTGCTAGAAGGGAAAAGGAAGCTGGTATATTTCCAGAAGCAGAACTTGACCTGTTCATGAAGGCTACTGCAGTGAAAGGAACAGAAAGCAGTCTCATTACAGACTATACTCTCAAAATATTAGGGCTTGATATTTGTAAGGACACTATAGTTGGTGATGAAATGAATAGAGGTGTATCTGGAGGTCAAAAGAAACGTGTGACCACAGGTGAAATGATTGTTGGTCCTACAAAAACACTATTCATGGATGAAATATCAACTGGTCTTGATAGTTCAACAACATTTCAAATTGTGAAATGTTTGCAACAAATTGTGCACCTAACTGAAGGAACAATCTTAATGTCACTTCTTCAACCAGCTCCTGAGACATTCGATCTTTTTGATGACATTATTCTTATATCTGAGGGTCAAGTTGTGTACCAAGGTCCACGTGAACACATTGTTGAATTCTTTGAATCTTGTGGGTTCCGTTGCCCTGAAAGAAAGGGAACCGCTGATTTCTTGCAAGAGGTTACATCAAGAAAGGACCAAGAACAATATTGGGCAGACAAAAACAGACCATACAGATATGTTTCTGTGTCAGAGTTTGCAAACAAATTCAAAAGATTCCATGTTGGAGTACGTCTTGAACAAGAATTATCTGTTCCATTTGACAAGTCAAGTGCACACAAAGCAGCTCTTGTTTACAGCAAAAACTCAGTTCCAACAGGGGACATTTTTAAAGCATGTTGGGACAAAGAATGGCTACTTATCAAAAGAAACTCCTTTGTCTACATTTTCAAGACAGCTCAAATTTGCATCATTGCTATCATCGCAGCAACTGTGTTTTTAAGGACTGAAATGAAAAGAGATACTGAAGATGATGCTGCACTTTACGTTGGTGCGATTTTGTTCGCTATGATTATGAACATGTTCAATGGTTTTGCTGAACTTGCACTAACAATTCAAAGGCTTCCTGTGTTTTATAAACAAAGAGATCACCTTTTCCATCCTGCTTGGACTTACACAGTTCCAAATTTTCTGTTGCGTCTTCCGATTTCTATGTTTGAGTCTCTTGCTTGGATGGTTGTTACCTACTACACCATTGGATTCGCTCCCGAAGCCAGCAGGTTCTTTAAGCAATTTTTGTTGGTGTTCCTTATCCAACAAATGGCAGCTGGGATGTTTAGGTTCATTGCTGGAACATGTAGGACAATGATTATTGCAAATACTGGTGGAGCACTCATGCTTCTTGTTGTTTTTCTACTTGGTGGTTTCATCCTTCCTAAACGTTCAATTCCTGACTGGTGGGTTTGGGCTAATTGGGTTTCACCATTGACCTATGCTTACCATGCCTTGGTTGTGAATGAAATGTATGCTCCAAGATGGATGCATCCAAATACTTCTGGAGATAAAACTACCACATTGGGTCTGGCTGTATTGAAGAACTTTGATGTTTATGCTAATGAAAATTGGTATTGGATTGGTGCTGGAGCTCTTGCTGTTTTAATTGTTTTTTACAATGTTCTCTTCACCCTTACACTTATGTACCTAAGTCCTTTTGGAAACAAACAAGCAATTATATCTGAGGAAGATGCAACTGAATTGGAGGGTGAAGGAGATGTAAACGAACCAAGACTCGTGAGGCCGCCTTCCAACCGAGAATCAATGCTTCGATCACTATCCAAAGCTGATGGAAACAATTCAAGGGAAGTGGCAATGCAAAGAATGAGTAGCCAAAATCCAAACGGATTAAGAAATGCTGATGCAGACACTGGAAATGCACCAAGAAGAGGAATGATTCTACCTTTCCAACCACTTGCAATGTCCTTTGAGAGTGTTAATTACTTTGTGGACATGCCTGCAGAAATGAAAGAGCAGGGAGTGACAGAAGATAGGTTACAATTGCTAAGGGAAGTAACCGGTTCCTTTAGGCCTGGAGTTCTTACTGCACTAATGGGAGTTAGTGGTGCCGGGAAGACAACTTTAATGGATGTTTTAGCAGGAAGAAAGACTGGTGGCTACATTGAAGGAGATGTTAGAATCTCTGGATACCCTAAGAACCAAGAAACCTTTGCAAGAGTTTCTGGTTATTGTGAACAAACTGATATTCATTCACCTCAAGTTACTATCAGAGAATCTTTGATGTACTCTGCTTTCCTTCGGTTGCCTAAAGAAGTTGGTAATGAGGAAAAGATTCAATTTGTGGAGCAAGTGATGGATTTGGTAGAGCTGCAAAGTCTCAAGGATGCTATTGTGGGGCTACCAGGAGTCACAGGGTTGTCAACTGAACAAAGAAAGAGGCTGACAATTGCGGTCGAGCTTGTTGCTAATCCTTCAATCATATTCATGGATGAGCCAACTTCTGGTCTAGATGCAAGAGCAGCTGCTATTGTTATGAGGACTGTAAGAAACACTGTTGATACTGGAAGAACAGTTGTGTGCACAATTCATCAACCTAGCATTGATATCTTTGAAGCCTTTGATGAGCTCATATTGATGAAAAGAGGAGGGCAACTTATCTATGGAGGACCTTTAGGTCGGAATTCACACAAGATTATTGAATACTTTGAGGAAATTCCTGGTGTCCCAAAAATCAAGGAAATGTACAATCCTGCAACATGGATGCTAGAAGTTAGCTCCGTAGCCGCTGAAGTCCGTCTTGGAATGGATTTTGCTGAATACTACAAGTCATCAGCTTTGTTTCAGAGAAGCAAAGCTCTTGTAAAGGAGTTAAGTACACCACCACCAGGAAGTAGTGATTTGTTTTTCGCTACGAAGTACTCTCAATCAACATTTGGACAATTCACATCTTGTCTTTGGAAGCAGTGGTTGACATATTGGAGGAGTCCAGATTACAATCTAGTCAGATATTTTTTCTCCTTGGCTTGTGCTCTCATGATAGGGACAGTATTTTGGAAAGTTGGCGAAAACAAGGAGAGCTCAACCGATCTGACACTGGTTATAGGAGCAATGTATGCTGCAGTTATTTTTGTGGGAATTAACAATTGTCAAACAGTTCAACCAGTTGTAGCCATTGAAAGAACAGTGTTCTATAGAGAAAGAGCTGCTGGAATGTATGCTCCTTTGCCTTATGCCTTAGCACAGGTTCTCATTGAAGTACCATTTGTGCTATTTCAAGCATGTTATTACTCACTCATAGTGTATGCTATGGTGAGTTTTGAATGGAAGTTAGAAAAGTTCTTTTGGTTCGTCTTCGTCAGCTTCTTCTCCTTCTTGTACTTCACTTACTATGGAATGATGACTGTTTCCATCACACCAAACCATCAAGTTGCGTCAATCTTTGCAGCAGCGTTCTATGGACTCTTCAACCTCTTCTCTGGTTTCTTTATCCCAAGACCTAAAATTCCAGGATGGTGGGTATGGTATTATTGGATCTGTCCAGTAGCATGGACAGTGTATGGATTGATTGTGTCTCAATATCACGATATAGATGATCCCATCAATGTGCTCGGAGCTACTCAAAACTTCACTGTCAAAGGATATATTGAACACCATTATGGTTTCAAACCTGATTTCATGGGTCCAGTTGCAGGAGTTTTGGTTGGTTTCACTTGCTTCTTTGCCTTTATATTTGCCTTCTGCATCAAGGCACTGAACTTCCAATCAAGATAA 4443 0.3952 MDSNLSRSISRSLSRSSWKMEEVFASGRYSRRTSQVDEDEEALKWAAIEKLPTYDRLRTSIMQTFTEGDQPQPGNRQQHKEVDVTKLDMNERQQIIDKIFKVAEEDNEKYLRKFRNRIDKVGIRLPTVEVRFKNLTVEADSFVGSRALPTLPNTALNILESLIGLFGFNTTKRTKLTILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVQGDITYNGHRLNEFVPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEAELDLFMKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILISEGQVVYQGPREHIVEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWADKNRPYRYVSVSEFANKFKRFHVGVRLEQELSVPFDKSSAHKAALVYSKNSVPTGDIFKACWDKEWLLIKRNSFVYIFKTAQICIIAIIAATVFLRTEMKRDTEDDAALYVGAILFAMIMNMFNGFAELALTIQRLPVFYKQRDHLFHPAWTYTVPNFLLRLPISMFESLAWMVVTYYTIGFAPEASRFFKQFLLVFLIQQMAAGMFRFIAGTCRTMIIANTGGALMLLVVFLLGGFILPKRSIPDWWVWANWVSPLTYAYHALVVNEMYAPRWMHPNTSGDKTTTLGLAVLKNFDVYANENWYWIGAGALAVLIVFYNVLFTLTLMYLSPFGNKQAIISEEDATELEGEGDVNEPRLVRPPSNRESMLRSLSKADGNNSREVAMQRMSSQNPNGLRNADADTGNAPRRGMILPFQPLAMSFESVNYFVDMPAEMKEQGVTEDRLQLLREVTGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGYPKNQETFARVSGYCEQTDIHSPQVTIRESLMYSAFLRLPKEVGNEEKIQFVEQVMDLVELQSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELILMKRGGQLIYGGPLGRNSHKIIEYFEEIPGVPKIKEMYNPATWMLEVSSVAAEVRLGMDFAEYYKSSALFQRSKALVKELSTPPPGSSDLFFATKYSQSTFGQFTSCLWKQWLTYWRSPDYNLVRYFFSLACALMIGTVFWKVGENKESSTDLTLVIGAMYAAVIFVGINNCQTVQPVVAIERTVFYRERAAGMYAPLPYALAQVLIEVPFVLFQACYYSLIVYAMVSFEWKLEKFFWFVFVSFFSFLYFTYYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPGWWVWYYWICPVAWTVYGLIVSQYHDIDDPINVLGATQNFTVKGYIEHHYGFKPDFMGPVAGVLVGFTCFFAFIFAFCIKALNFQSR* 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0385 1480 Gene3D - 165 477 IPR027417 -
Mtr8g0385 1480 MobiDBLite consensus disorder prediction 824 857 - -
Mtr8g0385 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 436 IPR027417 -
Mtr8g0385 1480 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 9 1480 - -
Mtr8g0385 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 878 1130 IPR003439 GO:0005524
Mtr8g0385 1480 Pfam ABC transporter 179 361 IPR003439 GO:0005524
Mtr8g0385 1480 Pfam ABC transporter 906 1058 IPR003439 GO:0005524
Mtr8g0385 1480 CDD ABCG_PDR_domain1 172 418 IPR034001 -
Mtr8g0385 1480 Pfam Plant PDR ABC transporter associated 732 797 IPR013581 -
Mtr8g0385 1480 Pfam ABC-2 type transporter 516 726 IPR013525 GO:0016020|GO:0140359
Mtr8g0385 1480 Pfam ABC-2 type transporter 1204 1417 IPR013525 GO:0016020|GO:0140359
Mtr8g0385 1480 Pfam ABC-2 type transporter 1087 1147 IPR043926 GO:0140359
Mtr8g0385 1480 Pfam ABC-2 type transporter 394 447 IPR043926 GO:0140359
Mtr8g0385 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 436 IPR003439 GO:0005524
Mtr8g0385 1480 Pfam ABC-transporter N-terminal 85 153 IPR029481 -
Mtr8g0385 1480 SMART AAA_5 915 1107 IPR003593 -
Mtr8g0385 1480 SMART AAA_5 188 413 IPR003593 -
Mtr8g0385 1480 MobiDBLite consensus disorder prediction 802 862 - -
Mtr8g0385 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 217 IPR027417 -
Mtr8g0385 1480 Gene3D - 892 1124 IPR027417 -
Mtr8g0385 1480 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1480 - -
Mtr8g0385 1480 CDD ABCG_PDR_domain2 875 1113 IPR034003 -
Mtr8g0385 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 899 1114 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0385 Mtr-Chr8 4390278 4400979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0385 K08711 - gmx:100798588 2553.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0385 8 4390278 4400979 Mtr8g0385 8 4390278 4400979 ECH
Mtr2g3550 2 49569615 49580407 Mtr8g0385 8 4390278 4400979 PCT