Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3550 ATGGAAGGGAGTTTAAGTAGAAGCATAAGTAGGAGTTTAAGCAGGTCAAGTTGGAGAATGGAGGGAGTGTTTGCTAGTGGAAGATATTCAAGAAGGACTTCTAATCTTGATGAAGATGAAGAAGCTCTCAAATGGGCTGCCATAGAGAAATTGCCTACTTATGATAGACTAAGAACAAGTATACTTCAAACATATGCAGAAGAATATGGTGATCAAGATCATCCAAACAAAGTGCAACATAGAGAAGTTGATGTTAGGAAATTAGATGTCAATGAAAGACAACAATTTATTGACAAAATCTTTAAGGTTGCTGAAGAAGATAATCAAAAGTATCTTAGCAAGTTCAGAAACAGAATTGATAAGGTTGGTATTAAACTCCCAACAGTAGAGGTGAGGTTTGAAAATCTAAGCATTGAGGCTGATTGTTATGTTGGAAGCAGAGCTTTGCCAACCTTACCAAATGTTACATTGAATATGGTTGAATCTGCTCTCCGCATTTTTGGTATTAGTACTGCCAAGAGAACAAAACTCACCATACTTAAAAATGTTTCTGGCATTATTAAACCTTCAAGGATGACCCTTTTGCTAGGACCTCCTTCTTCAGGGAAAACGACCCTATTACTAGCTTTGGCTGGAAAATTGGACACTGACTTGAGGGTAGAAGGAGAAATCTCTTACAATGGTTACAAGCTTAATGAATTTGTCCCTAGAAAGACTTCAGCCTATATTAGCCAAAATGATGTACATTTGGGTGAAATGACTGTAAAAGAAACCATGGATTTCTCAGCTAGATGCCAAGGAGTTGGAACACGATATGACCTATTGTCGGAACTTGCTAGAAGGGAAAAGGATGCAGGGATATTTCCAGAGGCAGAACTAGACCTTTTCATGAAGGCTACTGCAATGGAAGGAACAGAAAGCAGTCTCATTACTGACTATACTCTTAAAATACTAGGGCTTGATATATGCAAAGATACCATTGTGGGTGATGAAATGCAAAGAGGCATATCTGGTGGCCAAAAAAAGCGTGTCACAACAGGTGAGATGATTGTTGGTCCTACAAAAACATTGTTCATGGATGAAATATCAACTGGTCTTGATAGTTCCACAACATATCAGATAGTGAAATGTTTGCAACAAGTTGTTCACCTCACTGAAGCAACCATATTCATGTCCTTACTTCAACCTGCTCCTGAGACATTTGATCTCTTTGATGATATTATCTTAATATCAGAGGGTCAGATAGTATATCAAGGCTCACGTGACCATGTCCTTCAATTCTTTGAGTCATGTGGGTTTAAATGTCCTGAGAGAAAAGGAACTGCAGATTTCTTGCAAGAGGTTACTTCAAGGAAAGATCAAGAACAATACTGGTCAAACAGAAACATACAATACCGTTATATAACAGTAACTGAGTTTGCAAACAGTTTCAAACATTTCCATGTTGGAACACAGCTTCAAAATGAACTATCTCTACCATTTGACAAGTCAACAGGACATAGAGCATCTCTTGTTTTCAAGAGATACACTGTCTCTAAAATGGGACTTCTCAAAGCATGTTGGGACAAAGAATGCCTTTTAATAAAGAGAAACTCTTTTATTTACATATTCAAGTCAGTTCAAATATGCATTATTGCTGTGATATGTGGAACAGTTTTTATAAGGACTAAAATGCATCAAAGAAATGAGGGTGATGCATCTGTTTATATTGGTGCAATTTTGTTTACTATGATTATGAACATGTTCAATGGTTTCTCTGAGTTGCCACTCACAATTGCAAGACTTCCTGTGTTCTACAAACATAGAGATCACCTTTTTCATCCTCCATGGACTTACACTCTCCCTAATTTTCTTCTAAGGATTCCTATTTCCATTTTTGAGGCTATAGTTTGGGTTCTTATTACATATTACACAATTGGATTTGCACCTGAAGCTAGTAGGTTCTTCAAGCACTTGTTGTTGGTGTTTCTTGTTCAACAAATGGCAGCTGGGATGTTCAGGGTAATATCTGGAGTTTGTAGGACAATGATCATTGCCAACACTGGTGGATCACTCATGCTTCTTCTTGTTTTCCTACTTGGAGGTTTCATCCTTCCTAAACGTGACGTTCCAAATTGGTGGGTGTGGGGCTATTGGGTTTCTCCATTGTCTTATGCTTTCAATGCATTTTCTGTGAATGAAATGTTTGCTCCTAGGTGGAGCAAACCGTCTTCAGATGGTTTTAACTCATTGGGTGTAGCCACATTAAATATCTTTGATGTTTATTCAGAAGAAAATTGGTACTGGATAGGTGTAGCAGCTCTTCTTGGTTTCACTGTTTTCTATAATGTTCTATTCACCCTTGCACTTATGTACCTAAACCCTGTTGGAAAGAAACAAGCAATTATATCAGAAGAAGAAGCAAGTGAAATGGAAACTGGAGGAGATTCCAAGGAGGAACCTAGACTTGCGAGGAAGGAGTCCAACAAAGGGAATAACACAAAAGAAGTAGCAATGCAGAGAATGGGTAGTAGAGATAATCCAACACTTGAGTCAGCCACTGGAGTTGCTCCAAAGAGAGGAATGGTTCTTCCTTTTCAACCACTTGCAATGTCTTTTGATAGTGTTAATTACTATGTCGATATGCCAGCTGAAATGAAAGAGCAAGGAGTAACAGATAATAGGCTACAATTGCTTAGAGAAGTAACTGGTGCATTCAGGCCTGGAGTTCTAACGGCTTTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCTGGAAGGAAGACAGGTGGTTACATTGAAGGAGATGTTAGAATCTCTGGCTTCCCTAAGAATCAAGAAACATTTGCAAGAATTTCTGGATACTGCGAACAAACCGATATCCATTCACCACAAGTTACTGTCAGAGAATCTGTGATTTACTCGGCTTTCCTTAGGTTACCTAGAGAAGTCAGTAGTGAGGAAAAAATGAAATTTGTGGATGAAGTAATGGATTTGGTGGAGCTGGATAATCTTAGCGATGCCATAGTTGGACTTCCAGGTGTTACAGGGTTGTCAACCGAACAACGAAAAAGGCTAACAATAGCGGTTGAGCTTATTGCTAATCCTTCAATCATTTTCATGGATGAACCAACTTCAGGTCTTGATGCAAGAGCTGCAGCAATTGTTATGAGGACAGTGAGAAACACTGTTGACACTGGAAGAACAGTTGTCTGCACAATTCACCAGCCTAGTATCGATATCTTTGAAGCCTTCGACGAGCTCCTTTTGATGAAGAGAGGAGGGCAAGTGATCTACTCAGGACCATTAGGAAGGAATTCACACAAGATTATAGAATATTTTGAGGCAATTCCAGGAGTCCCTAAAATTAAGGAGAAGTACAATCCAGCAACATGGATGTTAGAGGTAAGCTCAATAGCAGCTGAAGCTAGGCTTGGAATGGACTTTGCTGAATACTACAAAACATCGACATTGCATCAGAGAAACAAAGCTCTTGTAAGTGAGTTAAGTACACCACCACCAGGAGCAAAAGATGTATATTTCTCCACTCAGTTTTCTCAGTCAACTTTTGGACAATTTAAATCATGTCTATGGAAGCAATGGTTGACTTATTGGAGGAGTCCAGATTACAACCTTGTCAGATATTTCTTCACCTTGACAGCAGCTCTCATGGTAGGGACAGTGTTTTGGAAAGCCGGCGAGAAAAGGGGTAGCACAGCTGACTTGAACATGATCATAGGAGCATTATATGGTTCTATATTTTTTGTTGGTGTAAACAATTGTCAAACAGTTCAACCGGTTGTATCCGTTGAAAGAACTGTATTCTATCGAGAAAGAGCTGCTGGAATGTATTCTGCTTTACCTTACGCCCTTGCTCAGGTTATTTGTGAAATACCATATGTTTTTGGTCAAACTATATTTTTCTCAGTCATAGTGTATCCTATGGTGAGCTTTGAATGGAAAGTGGCGAAGGTGTGTTGGTTCTTCTTTGTGAGCTTCTTCTCTTTCTTGTACTTCACATATTATGGGATGATGACGGTTTCCATTACACCAAACCACCAAGTAGCAGCAATCTTTGGAGCAGCATTCTATGGACTCTTCAATCTCTTTTCTGGTTTTTTTATCCCAAGACCAAAAATTCCTAAATGGTGGGTTTGGTATTATTGGATTTGTCCAGTAGCATGGACAGTGTATGGATTAATTGTGTCACAGTATAGAGATGTGACAATAGGCATAAGTGTGCCTGGGGAGACTAATAAAACTGCAATCAACAAGTATATTGAAGATTATTATGGATTCGATCCTGATTTCATGGGACCAGTTGCTGCGGTTTTGGTTTCTTTCGCTATATTTTTTGCCTTTATATTTGCCTTCTGCATCAAGGCATTGAACTTCCAAACCAGATAA 4401 0.3892 MEGSLSRSISRSLSRSSWRMEGVFASGRYSRRTSNLDEDEEALKWAAIEKLPTYDRLRTSILQTYAEEYGDQDHPNKVQHREVDVRKLDVNERQQFIDKIFKVAEEDNQKYLSKFRNRIDKVGIKLPTVEVRFENLSIEADCYVGSRALPTLPNVTLNMVESALRIFGISTAKRTKLTILKNVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDTDLRVEGEISYNGYKLNEFVPRKTSAYISQNDVHLGEMTVKETMDFSARCQGVGTRYDLLSELARREKDAGIFPEAELDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDEMQRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQVVHLTEATIFMSLLQPAPETFDLFDDIILISEGQIVYQGSRDHVLQFFESCGFKCPERKGTADFLQEVTSRKDQEQYWSNRNIQYRYITVTEFANSFKHFHVGTQLQNELSLPFDKSTGHRASLVFKRYTVSKMGLLKACWDKECLLIKRNSFIYIFKSVQICIIAVICGTVFIRTKMHQRNEGDASVYIGAILFTMIMNMFNGFSELPLTIARLPVFYKHRDHLFHPPWTYTLPNFLLRIPISIFEAIVWVLITYYTIGFAPEASRFFKHLLLVFLVQQMAAGMFRVISGVCRTMIIANTGGSLMLLLVFLLGGFILPKRDVPNWWVWGYWVSPLSYAFNAFSVNEMFAPRWSKPSSDGFNSLGVATLNIFDVYSEENWYWIGVAALLGFTVFYNVLFTLALMYLNPVGKKQAIISEEEASEMETGGDSKEEPRLARKESNKGNNTKEVAMQRMGSRDNPTLESATGVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKEQGVTDNRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKNQETFARISGYCEQTDIHSPQVTVRESVIYSAFLRLPREVSSEEKMKFVDEVMDLVELDNLSDAIVGLPGVTGLSTEQRKRLTIAVELIANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSIAAEARLGMDFAEYYKTSTLHQRNKALVSELSTPPPGAKDVYFSTQFSQSTFGQFKSCLWKQWLTYWRSPDYNLVRYFFTLTAALMVGTVFWKAGEKRGSTADLNMIIGALYGSIFFVGVNNCQTVQPVVSVERTVFYRERAAGMYSALPYALAQVICEIPYVFGQTIFFSVIVYPMVSFEWKVAKVCWFFFVSFFSFLYFTYYGMMTVSITPNHQVAAIFGAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYRDVTIGISVPGETNKTAINKYIEDYYGFDPDFMGPVAAVLVSFAIFFAFIFAFCIKALNFQTR* 1467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3550 1466 MobiDBLite consensus disorder prediction 807 825 - -
Mtr2g3550 1466 Pfam Plant PDR ABC transporter associated 733 796 IPR013581 -
Mtr2g3550 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 437 IPR027417 -
Mtr2g3550 1466 CDD ABCG_PDR_domain2 861 1099 IPR034003 -
Mtr2g3550 1466 MobiDBLite consensus disorder prediction 826 844 - -
Mtr2g3550 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 217 IPR027417 -
Mtr2g3550 1466 Pfam ABC-transporter N-terminal 93 155 IPR029481 -
Mtr2g3550 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 164 437 IPR003439 GO:0005524
Mtr2g3550 1466 CDD ABCG_PDR_domain1 173 419 IPR034001 -
Mtr2g3550 1466 Pfam ABC-2 type transporter 1190 1403 IPR013525 GO:0016020|GO:0140359
Mtr2g3550 1466 Pfam ABC-2 type transporter 517 727 IPR013525 GO:0016020|GO:0140359
Mtr2g3550 1466 MobiDBLite consensus disorder prediction 800 847 - -
Mtr2g3550 1466 SMART AAA_5 901 1093 IPR003593 -
Mtr2g3550 1466 SMART AAA_5 189 414 IPR003593 -
Mtr2g3550 1466 Pfam ABC-2 type transporter 395 448 IPR043926 GO:0140359
Mtr2g3550 1466 Pfam ABC-2 type transporter 1073 1134 IPR043926 GO:0140359
Mtr2g3550 1466 Gene3D - 878 1111 IPR027417 -
Mtr2g3550 1466 Gene3D - 164 478 IPR027417 -
Mtr2g3550 1466 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 9 1466 - -
Mtr2g3550 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 886 1101 IPR027417 -
Mtr2g3550 1466 Pfam ABC transporter 180 362 IPR003439 GO:0005524
Mtr2g3550 1466 Pfam ABC transporter 892 1044 IPR003439 GO:0005524
Mtr2g3550 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 864 1117 IPR003439 GO:0005524
Mtr2g3550 1466 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3550 Mtr-Chr2 49569615 49580407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3550 K08711 - gmx:100801386 2481.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3550 2 49569615 49580407 Mtr2g3550 2 49569615 49580407 ECH
Mtr2g3550 2 49569615 49580407 Mtr8g0385 8 4390278 4400979 PCT