Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0374 ATGGAAAACAACGTACCAATAATAACCAAGAGAGTATGGAGTATGATACGTGTGGCTTTGTTCATGTTAAGAAAAGGTATATCAAAGGGAAAACTAATGATGGACCTCAACATGATGGTCAAACGCCGTAGCAAGCTTGCCGGAAAAGCCATCACCAACCTCATGTTTCATCACCACCATGGTGGCTCCACCTCAAGCCGCCGTAATGACACACGCCTCTCTACCACAAGGGAGTATGAGTTCAGCTGCAGCAACACACCCAACTACAAATTTGCCCTAAACAACAAGCGTCATAACTTCTTCACGTGTGCTCACGCGCCTCTCACAAAAGAAGACGACATTGTAACCGTTAATGCGGTTAAAGCTGTGTTGGAGAGCATGGTAAACAATAATGAAGTAATTGTCGAAGCTTCCCCGGCACTTCCCGGATTTGGAAGGACTCCTAAGGCGCGGCAGTTGAGGGTGACCGACTCACCTTTTCCGCTACACGACACTGACGCCGACGCCGAGGTGGACAAGGCTGCCGATGCATTCATAAGGAGGTTCTACTCGCAGTTGAGGAAACAAGATTGA 573 0.4799 MENNVPIITKRVWSMIRVALFMLRKGISKGKLMMDLNMMVKRRSKLAGKAITNLMFHHHHGGSTSSRRNDTRLSTTREYEFSCSNTPNYKFALNNKRHNFFTCAHAPLTKEDDIVTVNAVKAVLESMVNNNEVIVEASPALPGFGRTPKARQLRVTDSPFPLHDTDADAEVDKAADAFIRRFYSQLRKQD* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0374 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 189 - -
Mtr8g0374 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 189 - -
Mtr8g0374 190 Pfam Cotton fibre expressed protein 168 189 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0374 Mtr-Chr8 4249439 4250282 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0374 - - mtr:MTR_8g014020 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3552 2 49599400 49600267 Mtr8g0374 8 4249439 4250282 PCT