Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3552 ATGGAAAACAATCTACCAGTGATATCAAAGAGAGTGTGGAGTATGGTACGTGTAGCCTTCTTCATGTTGAGAAAAGGCATTTCAAAGGGAAAACTGATGATGGGCCTAAACATGATGCTCAAACGCCGCAGCAAGCTTGCCGGAAAAGCCATTGCCAATCTAATGTTCCACCATCACAGCCACCACAGCTCCTCCTCAAGCCGCTCTCACGACTCACGCCACCAATTTACCGCATCAAGGGAGTATGAATTCAGCTGCAGTAACACTCCTCATCACTTTTTCCCAATAGGGAAACGTCACCGCAGCAACAACCACAATCACAACAATTTCTTCACTTGCGCTCATACGCCACCTACGCAGGACGATGATGTGGCGACTATGAGCGCAATGAAGGCCGTGCTGGAGATGCTTAACAATGATCAAGCAATCGTAGAAGCATCTCCAGCACTACCTGGATTCGGGCGTAGCCCAATGGTGAGGCAATTGAGGGTGACTGACTCACCATTCCCTCTAAGAGAAGATGATGAGAAAGACAACCAAGTTGATAAGGCTGCTGAAGATTTCATAAACAGGTTTTACAGCCAGTTGAGGAAGCAAGATTGA 603 0.4726 MENNLPVISKRVWSMVRVAFFMLRKGISKGKLMMGLNMMLKRRSKLAGKAIANLMFHHHSHHSSSSSRSHDSRHQFTASREYEFSCSNTPHHFFPIGKRHRSNNHNHNNFFTCAHTPPTQDDDVATMSAMKAVLEMLNNDQAIVEASPALPGFGRSPMVRQLRVTDSPFPLREDDEKDNQVDKAAEDFINRFYSQLRKQD* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3552 200 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 199 - -
Mtr2g3552 200 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 199 - -
Mtr2g3552 200 Pfam Cotton fibre expressed protein 178 199 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3552 Mtr-Chr2 49599400 49600267 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3552 - - gmx:100802625 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3552 2 49599400 49600267 Mtr8g0374 8 4249439 4250282 PCT