Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0085 ATGGCGACAATTAACCCTTTTGATTTGTTGGGTGATGATGCTGAAGACCCTTCACAGTTGATTGCTGCTGAGCAACAGAAAGCGGCGGCTGCAGCGGCGGCGGCGCCCAAGAAGGGGCTGGACCAAGGCAAACAAACTGGTGCTGCCAAGAAGCCCGCTCAGTTACCTTCCAAACCACTTCCCCCTTCTCAGGCTGTGAGGGAGTCCAGAAATGAGCCATCTCGTGGGGGCCGTGGAGGTGGACGTGGATTTGGACGTGGTCGCGGTGATGGTGGCTTTCGTCGTGATTTCTCCAATGATGACAACTCATTGCCTGCTCCTCCTGCCAATCAAGGTTCTTTTGAAGGAGATTCTGCAAATCCCACTGAGAGACGTGGGTATGGTGCACCCCGTACTCCTTATCGTGTTGGCGGTGGCCCTGAACGTCGTGGAGGTTTTAGCAATGGTGAAGCTGGTGAAGGACGCCCACGAAGGACATTTGATCGCCACAGTGGAACTGGACGAGGTGGTGGATTTAAACGTGAAGGCGCTGGACGAGGCAATTGGGGAACTCAATCTGATGAAATTGCTCAGGTGACTGACGAAGTGGCAAATGAAACTGAAAAGAATGTTGCTGAGGACAAGCCTGTTGGCGAGGAAGATGCAGCAGCAGCTGATGGAAACAAGGAAACTCCTGCTCCCGAAGCTGAAGAAAAGGAGCCTGAGGATAAGGAGATGACACTGGAAGAATATGAGAAAGTGCTGGAGGAGAAAAGGAAAGCCCTGAATGTTAAGACTGATGGAGGAAGAAAGGTGGATACCAAGGAGTTTGAATCCTTGAAGCCTCTGTCATGCAAGAAAGAGAATGACGAGATCTTTGCCAAACTGGGATCTGACAAGGACAGGCGCAAAGATGCTATTGAGAAGGAGAAGGCAAGGAAGGCCCTGAGCATTAACGAGTTTCTGAAGCCTGCTGAAGGAGAGAAGTACTACAACCCAGGTGGACGTGGCGGTCGTGGTGGACGTGGTGGCCGTGGTGGTTCAAGGGGAGGAGGTGGTTATGGTGGAAATGCATATGGCAATGTCTCAGCCCCATCTATTGAGGACCCTGGGCAATTCCCAACCTTGGGTGGTGGTAAGTGA 1122 0.5214 MATINPFDLLGDDAEDPSQLIAAEQQKAAAAAAAAPKKGLDQGKQTGAAKKPAQLPSKPLPPSQAVRESRNEPSRGGRGGGRGFGRGRGDGGFRRDFSNDDNSLPAPPANQGSFEGDSANPTERRGYGAPRTPYRVGGGPERRGGFSNGEAGEGRPRRTFDRHSGTGRGGGFKREGAGRGNWGTQSDEIAQVTDEVANETEKNVAEDKPVGEEDAAAADGNKETPAPEAEEKEPEDKEMTLEEYEKVLEEKRKALNVKTDGGRKVDTKEFESLKPLSCKKENDEIFAKLGSDKDRRKDAIEKEKARKALSINEFLKPAEGEKYYNPGGRGGRGGRGGRGGSRGGGGYGGNAYGNVSAPSIEDPGQFPTLGGGK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0085 373 Gene3D - 154 269 - -
Mtr8g0085 373 SMART HABP4_PAI_RBP1_2 156 266 IPR006861 -
Mtr8g0085 373 Pfam Stm1 1 80 IPR019084 -
Mtr8g0085 373 MobiDBLite consensus disorder prediction 319 373 - -
Mtr8g0085 373 MobiDBLite consensus disorder prediction 184 198 - -
Mtr8g0085 373 MobiDBLite consensus disorder prediction 154 169 - -
Mtr8g0085 373 MobiDBLite consensus disorder prediction 199 239 - -
Mtr8g0085 373 Pfam Hyaluronan / mRNA binding family 156 259 IPR006861 -
Mtr8g0085 373 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 372 - -
Mtr8g0085 373 MobiDBLite consensus disorder prediction 103 118 - -
Mtr8g0085 373 MobiDBLite consensus disorder prediction 25 239 - -
Mtr8g0085 373 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 372 IPR039764 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0085 Mtr-Chr8 998354 1002266 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0085 K13199 - gmx:100791259 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0085 8 998354 1002266 Mtr8g0085 8 998354 1002266 ECH
Mtr8g0085 8 998354 1002266 Mtr7g2178 7 38007628 38011849 PCT