Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2178 ATGGCCACTACGAATCCATTTGATTTGCTTGGTGATGACGCTGAGGACCCTTCTCAGCTCATCGTTTCTGAACAGCTCAAAGCTGCTGCTGCTCCTCCTGCTGCTAAGAAAGGTGCTGTCAAGGAACAGGGCAAGCCTAATAAGCCTGCTTTGTTGCCTTCTAAGCCAACCCCTCCTGCTCAGGCTGTGAGGGAGTCCAGAAATGAAGGAGGACGCGGTGGTCGTGGATTTGGTGGACGAGGAGGTGACCGTGACCGTGGGTTTGGTGGACGTGGAGGTGACCGTGGATTTGGTGGTGGTCGTGGAGGTCGTGGTTTCGGTCGTGACTACTCAAATGATGACAATTCGTTCCCTGCCTCTGGAGCCCCTGAAAACCAGGGTCCTGTTGAAGAAGGAGATAGGAACTCAGAAAGACGTAGCTATGGTGGACCACGAGGTCCCTACCGCGGAGGCCGTCGTGGAGGTTTCAACAATGGTGATGCTGGTGAAGAGGGACGACCCCGAAGAACATTTGAACGCCACAGTGGCACTGGGCGAGGAAACGATTTCAAGCGTGAAGGTGCTGGAAGGGGTAACTGGGGAACAGAAACTGATGAAATTGCCCAGGTGACTGAAGAAGTCATGAATGAAGGTGAAAAGAATTTGGGTGATGAGAAGCCTGCAGTTGAAGCTGATGTTGCTGAAGGGAACAAGGATAGCCCTGCCAATGAAGCTGAAGAAAAGGAGCCTGAAGACAAGGAAATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGAAAGGCTCTGCAAACTCTAAAGACTGAAGAGAGAAAGGTTGACACTAAAGCATTTGAAACCATGCAGGCCTTATCGTGCAAGAAAGACAATACTGAAATCTTTGCTAAATTGGGAGCTGATAAGGATAAGCGCAAAGAGGCTTATGACAAGGAAGAGAAAGCCAAGAAGTCTGTCAGTATCAATGAGTTTCTGAAGCCAGCTGAAGGAGAATCCCACTATAACTCAGGTGGGCGTGGCAGGGGACGTGGTGGCCGTGGTGCACGAGGAGGAGGTTTCCGTGGAAATTCGTACAGCAATGTACCTGCTCCATCCATTGAAGATCCTGGGCATTTCCCTACCTTGGGTGCCAAGTGA 1137 0.5057 MATTNPFDLLGDDAEDPSQLIVSEQLKAAAAPPAAKKGAVKEQGKPNKPALLPSKPTPPAQAVRESRNEGGRGGRGFGGRGGDRDRGFGGRGGDRGFGGGRGGRGFGRDYSNDDNSFPASGAPENQGPVEEGDRNSERRSYGGPRGPYRGGRRGGFNNGDAGEEGRPRRTFERHSGTGRGNDFKREGAGRGNWGTETDEIAQVTEEVMNEGEKNLGDEKPAVEADVAEGNKDSPANEAEEKEPEDKEMTLEEYEKVLEEKRKALQTLKTEERKVDTKAFETMQALSCKKDNTEIFAKLGADKDKRKEAYDKEEKAKKSVSINEFLKPAEGESHYNSGGRGRGRGGRGARGGGFRGNSYSNVPAPSIEDPGHFPTLGAK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2178 378 Pfam Stm1 1 76 IPR019084 -
Mtr7g2178 378 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 378 IPR039764 GO:0003723
Mtr7g2178 378 Gene3D - 165 278 - -
Mtr7g2178 378 MobiDBLite consensus disorder prediction 302 320 - -
Mtr7g2178 378 PANTHER RGG REPEATS NUCLEAR RNA BINDING PROTEIN A 1 378 - -
Mtr7g2178 378 Coils Coil 250 273 - -
Mtr7g2178 378 MobiDBLite consensus disorder prediction 25 248 - -
Mtr7g2178 378 MobiDBLite consensus disorder prediction 162 192 - -
Mtr7g2178 378 MobiDBLite consensus disorder prediction 302 378 - -
Mtr7g2178 378 Pfam Hyaluronan / mRNA binding family 167 274 IPR006861 -
Mtr7g2178 378 MobiDBLite consensus disorder prediction 210 248 - -
Mtr7g2178 378 SMART HABP4_PAI_RBP1_2 167 275 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2178 Mtr-Chr7 38007628 38011849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2178 K13199 - gmx:100814825 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0085 8 998354 1002266 Mtr7g2178 7 38007628 38011849 PCT