Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0023 ATGAGGACAAGGCTAAGTTTTTTATGGTGTGTTTGGATTTACCTTTGTGGGTCATGTATGGGAAGATTTGTGGTAGAAAAAAACAATTTGAAAATAACTTCTCCAAAATCATTGAGAGGTATATATGAATGTGCAATTGGAAATTTTGGGGTCCCAAAATATGGAGGAACAATGATTGGAACAGTTGTGTATCCAAAACTTAATAAGAATGGTTGCACCAAATTTAATGATGCAGATACTTCCTTGAATTCCAAGCCAGGAAGCTTCCCTACATTTGTTCTTGTTGATCGGGGAGATTGTTATTTCACTTTAAAGGCATGGAATGCTCAGATTGGTGGAGCAGCAGCTATTCTTGTTGCAGATGATAGGGTAGAACCATTGATCACAATGGACACTCCGGAAGAAGGGAATGGTGCTACTAACGACGATTATGTTGAAAAGATTACAATTCCTTCTGCACTTATAAGCAAATCAGTTGGAGACAGTATCAAGAAAGCTCTCTCAAGTGGAGGAATGGTGAACGTAAATCTCGATTGGAGAGAGGCACTTCCACACCCTGATGAGAGAGTTGAGTATGAGTTATGGACAAGTAGCAATGATGAGTGTGGTCCAAAGTGTGAGAGTGAAATTAATTTCTTGAAGAGTTTTAAAGGAGCAGCTCAATTACTTGAGCAAAAAGGTTACACTCAGTTTACACCTCACTATATAACTTGGTATTGTCCAGAAGCATTCATCTTAAGCCAACAGTGTAAATCTCAGTGCATTAATAATGGGAGATACTGTGCACCTGATCCTGAACAAGATTTCACTAGAGGGTATGATGGAAAAGATGTTGTTATTCAAAATTTGCGCCAATCTTGCTTCTTTAAAGTTGCAAATGAAAGTGGTAAGCCTTGGCAATGGTGGGACTACGTTACTGACTTTGCAATCCGATGTCCAATGAGAGAAAGTAAATACACTGAAGAATGCTCCGATCAAGTTATTAAATCTCTTGGTGTTAATTTGAATAAGATTAAGGACTGTACTGGGGATCCTAATGCGAATGCTGAAAATCCCGTTCTTAAAGCTGAACAGGATGCACAGATTGGACAGGGTAGCCGTGGAGATGTTACTATACTTCCCACTCTCGTTATAAACAACAGACAATATAGAGGCAAACTGTCAAAAGCAGCAGTACTCAAGGCAATCTGTGCAAGTTTCCAAGAGACCACTGAGCCATCTATTTGTTTAACTCCAGACATGGAAACAAATGAGTGTTTGACAAACAATGGTGGTTGTTGGCAGGACAAAGCTGCCAACATTACTGCATGCAGGGACACTTTTCGAGGAAGAGTGTGTGAATGCCCTATTGTACAAAATGTAAAGTTTGTTGGTGATGGATATACTCACTGTGAAGCTAGTGGACCATTGAGGTGTGCAGTCAACAATGGAGGTTGTTGGAAGGGAGCCCGAGGTGGCAGGGCTTACTCTGCTTGTATCGATGACCGTACAAAAGGTTGCAAGTGTCCACCTGGATTCAGGGGTGATGGAGTCCACTCCTGTAAAGATGTCGATGAATGCAAAGAGAAATTGGCCTGTCAGTGCCCAGAATGCAACTGCAAAAATACCTGGGGAAGTTATGAATGCAGATGCAATAATGGTTTATTCTATGTGCGGGAAAGTGACATGTGTATTGGTAAATATAGCGCTTCGGTGTCTAGTGGAGGATTTATTTGGCTGGTTATACTGTTATTGGGTACGTGTGGTGCCGTAGGATATGTTTTCTACAAGTACAGAATTCAGAGATATATGGATGATGAAATAAGGGCAATAATGGCCCAATACATGCCATTGGATAATCAACCGGAGCACACAAATCAAGTTCAGCATGCTGTGTAG 1878 0.4079 MRTRLSFLWCVWIYLCGSCMGRFVVEKNNLKITSPKSLRGIYECAIGNFGVPKYGGTMIGTVVYPKLNKNGCTKFNDADTSLNSKPGSFPTFVLVDRGDCYFTLKAWNAQIGGAAAILVADDRVEPLITMDTPEEGNGATNDDYVEKITIPSALISKSVGDSIKKALSSGGMVNVNLDWREALPHPDERVEYELWTSSNDECGPKCESEINFLKSFKGAAQLLEQKGYTQFTPHYITWYCPEAFILSQQCKSQCINNGRYCAPDPEQDFTRGYDGKDVVIQNLRQSCFFKVANESGKPWQWWDYVTDFAIRCPMRESKYTEECSDQVIKSLGVNLNKIKDCTGDPNANAENPVLKAEQDAQIGQGSRGDVTILPTLVINNRQYRGKLSKAAVLKAICASFQETTEPSICLTPDMETNECLTNNGGCWQDKAANITACRDTFRGRVCECPIVQNVKFVGDGYTHCEASGPLRCAVNNGGCWKGARGGRAYSACIDDRTKGCKCPPGFRGDGVHSCKDVDECKEKLACQCPECNCKNTWGSYECRCNNGLFYVRESDMCIGKYSASVSSGGFIWLVILLLGTCGAVGYVFYKYRIQRYMDDEIRAIMAQYMPLDNQPEHTNQVQHAV* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0023 625 ProSitePatterns Calcium-binding EGF-like domain signature. 516 542 IPR018097 GO:0005509
Mtr8g0023 625 Gene3D Laminin 410 455 - -
Mtr8g0023 625 SMART egfca_6 516 558 IPR001881 GO:0005509
Mtr8g0023 625 PANTHER VACUOLAR-SORTING RECEPTOR 1 10 605 - -
Mtr8g0023 625 SUPERFAMILY PA domain 92 181 IPR046450 -
Mtr8g0023 625 Gene3D - 20 186 - -
Mtr8g0023 625 Coils Coil 625 625 - -
Mtr8g0023 625 CDD EGF_CA 516 547 - -
Mtr8g0023 625 Pfam PA domain 60 163 IPR003137 -
Mtr8g0023 625 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 10 605 - -
Mtr8g0023 625 Gene3D Laminin 470 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0023 Mtr-Chr8 285631 289933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0023 4 619 Miscellaneous Gene Families AT3G52850 70.874 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0023 - - gmx:100815266 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1806 7 34093778 34099793 Mtr8g0023 8 285631 289933 PCT