Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1806 ATGATCATTAAGTTGAATCCTTTGTTGTTGTGTGTTTTGGTTTTGTTTTTGGAGTGTTGTTTTGGTAGGTTTTTAGTGGAGAAGAATAGTTTGAGAATCACTTCTCCAAAATCGTTGAAGGGTAGTTATGAATGTGCCATTGGAAATTTTGGGGTGCCTCAGTATGGTGGAACATTGGTTGGTTCTGTTGTGTATCCTAATGTGAATCAGAAAGGATGCAAGAATTTTACTGATTTCAGTGCTTCGTTTCATTCCATGCCTGGAAATTTTCCCACCTTTGTTCTTGTTGATCGTGGAGATTGCTACTTCACTTTGAAGGCGTGGAATGCACAAAATGGTGGAGCAGCAGCTATTCTTGTAGCTGATGACAGAGAAGAAACACTAATCACGATGGACACTCCTGAAGAAGGGAATGTTGTAAACGATGATTATATAGAAAAGATTAATATTCCTTCTGCTCTTATCAGCAAATCCTTGGGGGATAGAATCAAGAAGGCTCTCTCAGACGGGGAGATGGTGCACATAAATCTTGATTGGCGAGAGGCTCTTCCACATCCTGATGACAGGGTTGAGTATGAATTATGGACAAATAGCAACGACGAATGTGGGCCAAAGTGTGATAATCAAATTAATTTTGTGAAGAGCTTTAAAGGAGCAGCTCAGCTACTTGAGAAGAAGGGGTTCACTCAATTTACCCCGCACTATATAACTTGGTATTGCCCTAAAGAATTTTTATTAAGCAGACGATGCAAGTCTCAGTGTATAAACCACGGGCGGTACTGTGCTCCGGACCCTGAGCAAGATTTCAATAAAGGGTATGATGGCAAAGATGTTGTTGTTCAGAACTTACGTCAAGCTTGCTTCTTTAAAGTGGCGAATGAAAGTGGAAGACCTTGGCAATGGTGGGATTATGTGACCGACTTTTCAATCCGTTGCCCCATGAAAGAGAAAAAATACACAGAAGAATGCTCGGATGAAGTTATTAAATCTCTTGGTGTTGATCTGAAGAAGATTAAAGACTGTGTTGGAGATCCTCTTGCCGATGTTGAAAACCCTGTTCTCAAAGCCGAACAGGAAGCACAGATTGGCAAAGAGTCTCGTGGTGATGTTACTATACTGCCTACTCTTGTTATAAACAACAGACAGTACAGAGGTAAGTTGTCAAGACCAGCGGTTCTCAAGGCAATGTGTGCAGGTTTCCAAGAGACCACTGAACCATCAATTTGCTTAACTCCAGACATGGAAACAAACGAGTGTTTGGAAAACAATGGTGGTTGTTGGAAGGAAAAATCATCTAATATTACTGCATGCAGGGACACTTTCCGAGGAAGAGTATGTGTATGCCCTGTTGTAAACAATATTAAGTTTGTTGGCGATGGATATACTCACTGTGAAGCTTCAGGAACCTTAAGCTGCGAATTCAACAATGGAGGTTGTTGGAAAGCATCCCATGGTGGAAGGCTTTACTCTGCTTGCCATGATGACTATAGAAAAGGTTGCGAGTGCCCGTCAGGGTTCAGAGGTGACGGAGTCCGGTCATGTGAAGATATTGATGAATGCAAAGAAAAGTCGGCTTGCCAGTGTCCACAATGCAAATGCAAAAATACCTTTGGGAGTTATGAGTGCAAGTGCAATAGCGGTTTGCTCTACTCACGAGAAAATGACACGTGTATTGGTAAATATACTTCTTCGGTAGTGAGTATTTGGATGATTATCCTTGTGATGGTTGTTACACTTTCTGGAGGATATGCATTTTACAAGTACAGAATCCAGAGATATATGGACACTGAGATACGTGCAATTATGGCTCAATACATGCCTTTGGATAATCAACCTCTTATTATTCCTAATCCTAATCAAGTTCATCATGATATTTAG 1878 0.41 MIIKLNPLLLCVLVLFLECCFGRFLVEKNSLRITSPKSLKGSYECAIGNFGVPQYGGTLVGSVVYPNVNQKGCKNFTDFSASFHSMPGNFPTFVLVDRGDCYFTLKAWNAQNGGAAAILVADDREETLITMDTPEEGNVVNDDYIEKINIPSALISKSLGDRIKKALSDGEMVHINLDWREALPHPDDRVEYELWTNSNDECGPKCDNQINFVKSFKGAAQLLEKKGFTQFTPHYITWYCPKEFLLSRRCKSQCINHGRYCAPDPEQDFNKGYDGKDVVVQNLRQACFFKVANESGRPWQWWDYVTDFSIRCPMKEKKYTEECSDEVIKSLGVDLKKIKDCVGDPLADVENPVLKAEQEAQIGKESRGDVTILPTLVINNRQYRGKLSRPAVLKAMCAGFQETTEPSICLTPDMETNECLENNGGCWKEKSSNITACRDTFRGRVCVCPVVNNIKFVGDGYTHCEASGTLSCEFNNGGCWKASHGGRLYSACHDDYRKGCECPSGFRGDGVRSCEDIDECKEKSACQCPQCKCKNTFGSYECKCNSGLLYSRENDTCIGKYTSSVVSIWMIILVMVVTLSGGYAFYKYRIQRYMDTEIRAIMAQYMPLDNQPLIIPNPNQVHHDI* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1806 625 ProSitePatterns Calcium-binding EGF-like domain signature. 516 542 IPR018097 GO:0005509
Mtr7g1806 625 Gene3D Laminin 410 455 - -
Mtr7g1806 625 CDD EGF_CA 516 547 - -
Mtr7g1806 625 Gene3D - 21 186 - -
Mtr7g1806 625 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 9 602 - -
Mtr7g1806 625 Pfam PA domain 61 163 IPR003137 -
Mtr7g1806 625 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 9 602 - -
Mtr7g1806 625 SMART egfca_6 516 558 IPR001881 GO:0005509
Mtr7g1806 625 Gene3D Laminin 470 554 - -
Mtr7g1806 625 SUPERFAMILY PA domain 56 170 IPR046450 -
Mtr7g1806 625 SUPERFAMILY EGF/Laminin 512 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1806 Mtr-Chr7 34093778 34099793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1806 8 625 Miscellaneous Gene Families AT3G52850 70.787 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1806 - - gmx:100807514 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1806 7 34093778 34099793 Mtr7g1806 7 34093778 34099793 ECH
Mtr7g1806 7 34093778 34099793 Mtr8g0023 8 285631 289933 PCT