Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0014 ATGGCCACAACACAGAGACAAATAAACAGCTCAACTGCATTTGATGACACTGAATATGAAGATTGGGAAAGCAATATTCATATACCAAATTCCATCTTAACTTATGGGAGTGAAATGGAGGAAGCTGAATGGCAGATGGTGCAAAAGAAAGGAAACCAATTTGTAGTGAATGACCAACCTTTCTATGTAAATGGATTCAACACTTATTGGTTGATGGTATTTGCTGCGGACGAGTCGACAAGAGGAAGGGTCACTCAGGTGTTCAAACATGCATCCTCAGTTGGCATGACAGTTTGTAGGACTTGGGCGTTTAATGATGGCCAATGGAGAGCCCTTCAGAAATCTCCATCACTTTATGATGAAGTAGTATTCAAAGCCCTGGATTTTGTGGTGAGTGAAGCAAAGAAATACAGAATCAGACTCATATTATCATTGGTTAACAATTGGGAGGCATATGGTGGAAAAGCACAATATGTCAAGTGGGGTAATGCTGCTGGCCTTAACTTGACCTCTGATGATGACTTTTTCTCACATCCAACTCTCAGAGGCTACTACAAGGACCATGTCAAGACTGTGCTCAATAGAGTTAACACACTCACAAATATTACTTATAAGGAAGATCCAACAATTTTTGCTTGGGAGCTAATGAATGAGCCTCGATGCACCTCTGACTCCTTGGGTGATACGTTACAGGAATGGATAAAAGAGATGGCATTCTATGTTAAGAGCATTGATCCGAAACACCTACTGGAGATTGGCCTAGAAGGATTTTATGGCCCCTCAACACCTCAGAGATTTCAGTTCAACCCAAATTCATATGCTCAACAGGTTGGAACTGATTTTATCAGAAACCACCAGGTTCTAGGTGTCGACTTTGCTTCTGCTCATATATATCCAGACTCTTGGATTTCACAATCAGTTGCTGATAGCCATATCCCATTTGTGAAGTCTTGGATGGAAGCCCACATAGATGATGCTGAAAAGTATCTTGGAATGCCGGTTGTTTTTGGTGAGTTTGGTGTATCTGCAAAAGATCCTGGTTATAATTCAACATATAGAGATACACTTATAAATACTGTGTACAAGACAATTCTAAACTCTACAAAGAAAGGAGGTAGTGGGGCTGGAAGCCTTTTGTGGCAGTTCTTTCCTGATGGAACAGATTACATGGATGATGGTTATGCAATTGTTCTCTCAAAAGCTCCTTCTACTTCAAGCATGATATCCCTTCAATCCACAAGGCTTGCTCTATTCAACTCCCTCTGCTCTGAGAGATGCCACTGGGGTTGTAAGAAGAAAAAGGTGTTGCAAAATGTACTCTATGAGGATGAGGAGTAG 1338 0.4103 MATTQRQINSSTAFDDTEYEDWESNIHIPNSILTYGSEMEEAEWQMVQKKGNQFVVNDQPFYVNGFNTYWLMVFAADESTRGRVTQVFKHASSVGMTVCRTWAFNDGQWRALQKSPSLYDEVVFKALDFVVSEAKKYRIRLILSLVNNWEAYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLRGYYKDHVKTVLNRVNTLTNITYKEDPTIFAWELMNEPRCTSDSLGDTLQEWIKEMAFYVKSIDPKHLLEIGLEGFYGPSTPQRFQFNPNSYAQQVGTDFIRNHQVLGVDFASAHIYPDSWISQSVADSHIPFVKSWMEAHIDDAEKYLGMPVVFGEFGVSAKDPGYNSTYRDTLINTVYKTILNSTKKGGSGAGSLLWQFFPDGTDYMDDGYAIVLSKAPSTSSMISLQSTRLALFNSLCSERCHWGCKKKKVLQNVLYEDEE* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0014 445 SUPERFAMILY (Trans)glycosidases 46 400 IPR017853 -
Mtr8g0014 445 Gene3D Glycosidases 44 418 - -
Mtr8g0014 445 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 12 444 - -
Mtr8g0014 445 PANTHER - 12 444 IPR045053 GO:0004553
Mtr8g0014 445 Coils Coil 440 445 - -
Mtr8g0014 445 Pfam Cellulase (glycosyl hydrolase family 5) 58 360 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0014 Mtr-Chr8 231254 233979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0014 21 444 Glycoside Hydrolase AT5G01930 70.657 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0014 K19355 - gmx:100801139 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1816 7 34180893 34205213 Mtr8g0014 8 231254 233979 PCT