Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1816 ATGAAGAAAATAATGGGAATATGTATTATTTTTTTATTCCTTTTTTTGATTCTAAGTTCTAATGCTTTTAGTAGGGTGGATGAAGAGGCACAAATGGAAGGCCAAGATCATGTACATAAACCTATCACAAATTATGGAAGTGAAACAATGTGGGACATGGAAGAGGATGAATGGCAAATGGTAGGGAAGAAAGGAAACCAATTTGTGGTGAATGGTCAGCCTTTCTATATAAATGGATTCAACACATACTGGTTAATGATGTTTGCTGCAGATGACTCCACCAGAGGAAAAGTCACTGAGGTTTTCAAACAAGCATCCTCACTAGGTATGACAGTTTGTAGGACTTGGGCTTTCAATGATGGCCAATGGCGGGCCCTACAAAAATCCCCTTCGGTTTATGACGAAGAAGTCTTCAAGGCCTTGGACTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGGCTGATATTATCATTGGCCAACAATTGGGAGGCATATGGTGGAAAAGCACAATATGTGAAATGGGGCAAAGATGCTGGCCTTAACTTGACCTCTGATGATGACTTCTACACACATTCAACCCTTAGAAGCTACTACAAGTCCCACGTTAAGACTGTGCTCAATAGAGTTAACACATTCACAAATATCACTTATAAGGAAGATCCTACCATTTTTGCTTGGGAACTCATGAATGAGCCTAGATGCAACTCTGATCCCACAGGTGACAAGTTACAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAAATTGATCCAAAACACCTAGTGGAGATTGGACTAGAAGGATTTTATGGCCCTTCAACACCTCAGAGACTTCAGTTCAATCCAAATACATATGCTCAACAGGTTGGAACTGATTTTATTAGGAACCATCAGGTTCTTGGAGTGGACTTTGCTTCTGTTCACATGTATGCTGACTCTTGGGTTTCACCACAAATTGCTGATACACATATCTCATTTGTAAAATCATGGATGGATGCACACATAGAGGATGCTGAAAAGTATCTTGGAATGCCAGTTGTTTTTTCTGAGTTTGGTGTATCATCCAAGGATCCTGGCTACAACTCAACATATAGAGACACACTAATAAGCACTGTTTACAGCGCAGTCCTAAACTCCACAAAGAAAGGAGGGAGTGGAGCTGGAAGCCTTTTGTGGCAGGTATTTCCTGAAGGAACCGATAATATGGATGACGGCTATGCTATTGTTTTCTCAAAATCTCCTTCCACTTCAAGTATTGTAACCCTTCAATCCACGAGGCTTGCTTTGTTCAACTCGGTGTGTTCTACCAGATGCAATTGGAGTTGTAAGAAGAAGAAAATGTTGGAGAAGATACTCTATCATGATGAACTCTAA 1380 0.4014 MKKIMGICIIFLFLFLILSSNAFSRVDEEAQMEGQDHVHKPITNYGSETMWDMEEDEWQMVGKKGNQFVVNGQPFYINGFNTYWLMMFAADDSTRGKVTEVFKQASSLGMTVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEAKKYKIRLILSLANNWEAYGGKAQYVKWGKDAGLNLTSDDDFYTHSTLRSYYKSHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCNSDPTGDKLQDWIQEMAFHVKKIDPKHLVEIGLEGFYGPSTPQRLQFNPNTYAQQVGTDFIRNHQVLGVDFASVHMYADSWVSPQIADTHISFVKSWMDAHIEDAEKYLGMPVVFSEFGVSSKDPGYNSTYRDTLISTVYSAVLNSTKKGGSGAGSLLWQVFPEGTDNMDDGYAIVFSKSPSTSSIVTLQSTRLALFNSVCSTRCNWSCKKKKMLEKILYHDEL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1816 459 Pfam Cellulase (glycosyl hydrolase family 5) 71 374 IPR001547 GO:0004553|GO:0071704
Mtr7g1816 459 Gene3D Glycosidases 58 432 - -
Mtr7g1816 459 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 9 459 - -
Mtr7g1816 459 SUPERFAMILY (Trans)glycosidases 63 417 IPR017853 -
Mtr7g1816 459 PANTHER - 9 459 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1816 Mtr-Chr7 34180893 34205213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1816 1 459 Glycoside Hydrolase AT5G01930 66.307 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1816 K19355 - gmx:100805357 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1816 7 34180893 34205213 Mtr7g1816 7 34180893 34205213 ECH
Mtr7g1816 7 34180893 34205213 Mtr8g0014 8 231254 233979 PCT