Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3590 ATGAGTTTTGGCGGTGTTCTATGGATATCTATGACTATATGCATCTTCTTCTCTTCCGTTTCTTTAGCTTTGAGTGTGAGTAGTGGATGCAGTAGTAAACCAGCAGTTGTATTCGTGTTCGGTGATTCCAACTCGGATACGGGTGGACTCGTTTCTGGACTCGGTTTCCCTGTCAATCTTCCAAATGGTCGTACTTTCTTTCACAGATCCACTGGTCGTTTGTCTGATGGACGCCTCGTTATCGACTTTCTCTGCCAAAGTTTGAATACAAGATTTTTGACCCCATACTTGGACTCCATGTCTGGATCCACATTCACAAATGGAGCAAACTTTGCGGTGGTTGGATCCTCTACCCTCCCAAAATATCTTCCTTTCTCTTTAAATATACAGGTCATGCAGTTCCAACATTTCAAAGCTCGTAGTCTTCAACTTGCTACCTCAGGTGCAAAAAATATGATCAACGACCAAGGCTTCCGGGATGCACTATACTTGATTGATATTGGGCAAAATGACCTTGCTGATTCATTTACCAAAAATCTGTCATATGTGCAAGTCATCAAGAGGATCCCAACAGTTATCACTGAAATTGAGAATGCTGTTAAGAGTTTGTATAATGAAGGTGGAAGGAAATTTTGGGTTCACAATACCGGGCCCTTTGGCTGTCTTCCTAAATTAATTGCACTGTCTCAGAAGAAGGATCTGGATTCATTCGGATGTCTTTCTAGTTACAATTCTGCTGCAAGATTGTTTAACGAAGCACTGTATCATTCAAGTCAGAAATTAAGAACTGAATTGAAGGATGCTACCTTAGTCTATGTTGATATTTATGCCATTAAGAATGACCTCATCACAAATGCCACCAAATATGGTTTCACAAATCCGCTAATGGTATGCTGCGGCTTTGGAGGGCCACCTTATAATTTTGATGCAAGAGTGACATGCGGTCAACCTGGTTATCAAGTTTGTGATGAAGGATCACGGTATGTGAGTTGGGATGGAATCCATTATACCGAGGCTGCAAATACATGGATAGCTTCAAAGATACTATCGACAGCTTATTCCACGCCACGCATACCTTTTGGTTTCTTCTGTCACTGA 1098 0.4144 MSFGGVLWISMTICIFFSSVSLALSVSSGCSSKPAVVFVFGDSNSDTGGLVSGLGFPVNLPNGRTFFHRSTGRLSDGRLVIDFLCQSLNTRFLTPYLDSMSGSTFTNGANFAVVGSSTLPKYLPFSLNIQVMQFQHFKARSLQLATSGAKNMINDQGFRDALYLIDIGQNDLADSFTKNLSYVQVIKRIPTVITEIENAVKSLYNEGGRKFWVHNTGPFGCLPKLIALSQKKDLDSFGCLSSYNSAARLFNEALYHSSQKLRTELKDATLVYVDIYAIKNDLITNATKYGFTNPLMVCCGFGGPPYNFDARVTCGQPGYQVCDEGSRYVSWDGIHYTEAANTWIASKILSTAYSTPRIPFGFFCH* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3590 365 CDD SGNH_plant_lipase_like 34 350 IPR035669 -
Mtr7g3590 365 PANTHER OS01G0329900 PROTEIN 14 365 - -
Mtr7g3590 365 Pfam GDSL-like Lipase/Acylhydrolase 37 348 IPR001087 GO:0016788
Mtr7g3590 365 SUPERFAMILY SGNH hydrolase 37 351 - -
Mtr7g3590 365 Gene3D SGNH hydrolase 31 355 IPR036514 -
Mtr7g3590 365 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 14 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3590 Mtr-Chr7 52925600 52929804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3590 37 348 Acyl Lipid Metabolism Gene Families AT4G10950 27.134 2.91e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3590 - - gmx:100797617 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3590 7 52925600 52929804 Mtr7g3590 7 52925600 52929804 ECH
Mtr7g3590 7 52925600 52929804 Mtr1g2923 1 40492890 40494989 PCT