Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2923 ATGGCTTCTACTAAGTACGTTGTTGCTTTACAAGTTGTGTTATTTTGCATATGTTTGGTTGTGGCAAATTCTGTTCACTTCAGTTACCCAGCAGTTTTCAACTTTGGTGATTCAAATTCAGACACAGGTGAACTTTGTGCAGCCAAGGGCTTTCAACCCGCCCCACCCAACGGACAAAATTACTTCAAAGCTCCAGCCGGGAGATTCAGCGATGGCCGTCTCATTGTTGACTTCTTAATGGATGCAATGGACTTGCCATTCTTAAATGCCTATCTGGATTCAGTGGGCTCGCCAAATTTCCATCACGGATGCAACTTTGCAGCAGCAGGTTCAACTATCCTTCCAGCAAATGCAGCATCAATCAGTCCATTTGGATTTGGCACTCAGGTAAATCAGTTTCTGCTATTCAAAGCCAAGGTTCTTGAAGTGCTTGCAGGCAAGAAATTTGATAAATATGTCCCAGCTGAAGACTATTTCCAGAAGGGGTTATACATGTTTGACATAGGCCAAAATGATCTTGCTGGCGCATTTTATTCAAAAGACTTGGACCAAATACTTTCCTCTATTCCAACAATTCTACTGGAATTTGAAACTGGTATAAAGAGACTATATGACCACGGGGCTAGGAATTTTTGGGTACATAACACAGGTCCACTTGGATGCTTGGGTCAAAATGTTGCCACATTTGGCCATGATAAATCAAAGATTGATGAACTAGGATGTCTTGGTGCACACAACCAAGCTGCTAAGGCCTTTAATCTACAGTTGCAAGCTTTGTGGGCAAAATTGCAGGGCCAGTATCTAGATCTAAATGTTACATATGTTGATATCTTTACCATAAAATTGGACCTCATTGCAAACTACTCAAAACATGGGTTTGAACAACCTTTTATGGCTTGCTGTGGATATGGAGGTCCGCCATTTAACTATGACAGTCGCGTTTCTTGTGGACTAACAACAACGATCTTGAATGGGACCACAATTACAGCAAAAGGTTGCAATGATAGCGGTGTGTATGTAAGCTGGGACGGGACTCATTACACTGAGGCTTCAAATCAATATGTTGCATCACAAATTCTCACCAGAAACTACTCCAACACTGATTTGTCATAA 1113 0.416 MASTKYVVALQVVLFCICLVVANSVHFSYPAVFNFGDSNSDTGELCAAKGFQPAPPNGQNYFKAPAGRFSDGRLIVDFLMDAMDLPFLNAYLDSVGSPNFHHGCNFAAAGSTILPANAASISPFGFGTQVNQFLLFKAKVLEVLAGKKFDKYVPAEDYFQKGLYMFDIGQNDLAGAFYSKDLDQILSSIPTILLEFETGIKRLYDHGARNFWVHNTGPLGCLGQNVATFGHDKSKIDELGCLGAHNQAAKAFNLQLQALWAKLQGQYLDLNVTYVDIFTIKLDLIANYSKHGFEQPFMACCGYGGPPFNYDSRVSCGLTTTILNGTTITAKGCNDSGVYVSWDGTHYTEASNQYVASQILTRNYSNTDLS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2923 370 Gene3D SGNH hydrolase 23 364 IPR036514 -
Mtr1g2923 370 SUPERFAMILY SGNH hydrolase 32 360 - -
Mtr1g2923 370 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 2 370 - -
Mtr1g2923 370 CDD SGNH_plant_lipase_like 30 361 IPR035669 -
Mtr1g2923 370 Pfam GDSL-like Lipase/Acylhydrolase 32 359 IPR001087 GO:0016788
Mtr1g2923 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2923 Mtr-Chr1 40492890 40494989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2923 30 359 Acyl Lipid Metabolism Gene Families AT4G10950 26.023 3.36e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2923 - - gmx:100813566 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2923 1 40492890 40494989 Mtr1g2923 1 40492890 40494989 ECH
Mtr7g3590 7 52925600 52929804 Mtr1g2923 1 40492890 40494989 PCT