Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3580 ATGGCCAATGAAGCTTCTACTTGCCTCTTGTTCCTATCTTTTCTCATTTTCTTCTGTTCTGGAACCAATGCATTTTCAACTTTTTCTGGAGCAAGATTCCTTCAAAAAAGCAAGATCTCAAAGTCTCAGATTCAGTTTCTTGTTACAAATCACAAGATTGGGAGAAAACTTCAAGACACAAACCCAGCACCAACAATCATCACTGTTCCTTCAACCAATCCTGTCACAACAGTTTCTCCAACAAATCCAGGTGCAACACCTGTCACAGTTCCTTCTACTACTCCACCATCTGTTCCATTATCACCAACAAATCCAGCAAATTCACCGGTACCTGTTACACCTATAACTGTTCCAGGAGGAACAACACCAGTGAATTCTTATCCACCACCATCACCATTATCAGGAGGAACAGGAACTGTTCCTGTCACAAATCCTCCACCTTCAAGCACAAGTCCTCCATCTTCTTCAGGAGGTAGCTGGTGTGTGGCTAAACCTGGAACACCACAATCTACACTTCAAACAGCATTGGACTATGCTTGTGGAACAAAAGGAACTGATTGTTCACAAATAAACCAAGGTGGTATCTGTTACAATCCAAATTCACTTCAAAACCATGCTTCTTTTGCATTCAACAGCTACTATGTAAAGAATCCTGCTGCAACAAGCTGTGACTTTGGAGGGGTTGCTACCATCACTAACACTAATCCTAGTTCTGGTACCTGCATCTTCCCATCATCTTCAGGAGGAGGAGCTGGCGCAGGCGCATCCGGCGGCTCTAGTACTACCTCATCTCCAGTAGGGTTTGGACCTCAAAGCTCTCCATTGGATTCCTCTCATTCAACTGGTCTGAGACCTTTGCTGAGCTGCATGGTTGTGGTGACATTATTGGTCGGTGGAAGACTCGGCATGAGCCCATAG 918 0.4444 MANEASTCLLFLSFLIFFCSGTNAFSTFSGARFLQKSKISKSQIQFLVTNHKIGRKLQDTNPAPTIITVPSTNPVTTVSPTNPGATPVTVPSTTPPSVPLSPTNPANSPVPVTPITVPGGTTPVNSYPPPSPLSGGTGTVPVTNPPPSSTSPPSSSGGSWCVAKPGTPQSTLQTALDYACGTKGTDCSQINQGGICYNPNSLQNHASFAFNSYYVKNPAATSCDFGGVATITNTNPSSGTCIFPSSSGGGAGAGASGGSSTTSSPVGFGPQSSPLDSSHSTGLRPLLSCMVVVTLLVGGRLGMSP* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3580 305 MobiDBLite consensus disorder prediction 64 161 - -
Mtr7g3580 305 MobiDBLite consensus disorder prediction 89 112 - -
Mtr7g3580 305 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 50 257 - -
Mtr7g3580 305 Gene3D - 155 247 - -
Mtr7g3580 305 Pfam X8 domain 160 230 IPR012946 -
Mtr7g3580 305 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 50 257 IPR044965 GO:0004553|GO:0005975
Mtr7g3580 305 MobiDBLite consensus disorder prediction 64 88 - -
Mtr7g3580 305 SMART X8_cls 159 243 IPR012946 -
Mtr7g3580 305 MobiDBLite consensus disorder prediction 252 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3580 Mtr-Chr7 52828001 52830635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3580 23 245 Glycoside Hydrolase AT2G05790 32.773 2.20e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3580 - - vun:114194324 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3580 7 52828001 52830635 Mtr7g3580 7 52828001 52830635 ECH
Mtr7g3580 7 52828001 52830635 Mtr1g3041 1 41611208 41613930 PCT