Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3472 ATGGTTACTTTGTGTTTATTACAAAGTGGGATTCCTGGTATAGTTCCTTTAATCACTTCTATTAGTGCAACTACTACTACTTCACGTGCCAATGATCACGTTCACGTGCATCAATCTCACGTAACCACAGTGAGGCGATCAAACAAGTCCTCCATGTTTTCCAGATTCATAGGTAGCTCCGCCAGAAACAATTGCCTTGCAGCAGTCAACGACGCCTTCACCGCGGAGAATGCAGACAGAACTGTGAAAGAAGGAGATGGACAAAATGGGAACTGGGTTTTCAAGGTTTTTGATCTTAATTCTGTTTGGAAAGGGGAACAAGAGAGTGGTGATAACGACGGAGATGAATGTGATGTTTGTAGAGTTGATGAAGAGGTAGACGATGAAAATGAAGATGAAGAGATTCGGTTTGATAGAGAGTCGTTTTCTAGAATGCTTCGTAGGGTAACTTTAGTTGAAGCAAGAATGTATGCACACATGTCTCACTTGGGGAATTTGGCATACTCTATTCCCAATATCAAGCCAGGGAACCTCTTGAAAAGGTGTGGTCTGCGTTTTGTAACTTCGTCGATAGAGAAGAAGGAACTGGCTGCTTCAATTAAGAAAGAAGAAACCAATGGGAAAGATGCCGGAGAAAGAAAAGTGGAAAAGAATGGTGAATTGAAGACAAGTGCATCTAATGCTTGTGAGATTGCAGTGGTTGAAGGTTCAGTTGAAGGAAGCAACGGGAGCGTTGATACTGTGAACATGATGGACACTGATGTTGGCTGTTTGATGGCAACTACCAATTCAATGACAGCAGTTGTTGCCGCAAATGAGGAAGTAAAACAATCTTTTGCAGATGATTTAAACTCAACAAGTTCTTCACCCTGTGAATGGTTCATATGCGATGACGATCGTAGTTCTACGAGATATTTTGTTATTCAGGGTTCAGAGTCATTTGAATCCTGGCAGGCAAACCTACTTTTTGAGCCAGTTCAATTTGAGGGGTTAGATGTCCTTGTCCATAGAGGTATATATGAGGCTGCTAAAGGGACATATCAGCAGATGTTACCAGAGGTTCATGCTCACCTAAAATCTCAAGGTTCTCGGGCAACTTTCCGTTTCACAGGCCATTCTCTTGGAGGAAGCTTGGCATTACTTATAAATCTTATGCTGTTGATTAGGAAGGAAGTGCCGATTTCTTCTTTGCTTCCCGTGATAACCTTTGGCTCCCCCTCCATCATGTGTGGAGGCGATCGTCTGCTCGAAAAGCTAGGATTACCGCGGAGCCACGTTCAAGGAATCACAATGCACAGAGACATAGTACCGCGAGCATTTTCATGCACGTACCCTAACCATGTCGCAGAATTACTAAAGGCTGTTAATGCCAGTTTCCGCAGTCATCCTTGTCTTAATAACCAAAAGCTGCTATATGCACCGATGGGAGAACTAATGATTCTACAACCAGATGAATTTTTTTCACCTAGCCATCATCTTTTGCCACCGGGCAGTGGTCTATATCTTTTGAGTGGTCCTCTTTCGGAATCAAATGACACAGAGAACCAGCTCAAAGCTGCTAAATTGGTCTTCTTGAACTCACCACATCCACTCGAGATATTAAGTGACCGATCCGCCTATGGACCTGGAGGAGCCATACACAGAGATCATGACATGAATTCGTACTTAAAATCTGTTAGAACCGTGATTCGCCAAGAACTTAGCCAAATCCGCACGGCGGCAAGAAGAGAACTACGACGAAAGGTGCGGTGGCCTCTTGTGGCACGACGTGTAAGTGATGCGGACATTGTTGGTGGGAGATCCATGGTATCTGTCCATATTATTCAAGACCAGCCTCCCTTTTCAGGGATTAAACAGACAGGTAGAAAGTCCTTGAAAAGGTTTTGTAGGCTTGTTGCATCCCAACATATGCAACTGTTTGTAGTGTTCTTGCTTCCTACTCTCGGAAACATATAA 1956 0.4356 MVTLCLLQSGIPGIVPLITSISATTTTSRANDHVHVHQSHVTTVRRSNKSSMFSRFIGSSARNNCLAAVNDAFTAENADRTVKEGDGQNGNWVFKVFDLNSVWKGEQESGDNDGDECDVCRVDEEVDDENEDEEIRFDRESFSRMLRRVTLVEARMYAHMSHLGNLAYSIPNIKPGNLLKRCGLRFVTSSIEKKELAASIKKEETNGKDAGERKVEKNGELKTSASNACEIAVVEGSVEGSNGSVDTVNMMDTDVGCLMATTNSMTAVVAANEEVKQSFADDLNSTSSSPCEWFICDDDRSSTRYFVIQGSESFESWQANLLFEPVQFEGLDVLVHRGIYEAAKGTYQQMLPEVHAHLKSQGSRATFRFTGHSLGGSLALLINLMLLIRKEVPISSLLPVITFGSPSIMCGGDRLLEKLGLPRSHVQGITMHRDIVPRAFSCTYPNHVAELLKAVNASFRSHPCLNNQKLLYAPMGELMILQPDEFFSPSHHLLPPGSGLYLLSGPLSESNDTENQLKAAKLVFLNSPHPLEILSDRSAYGPGGAIHRDHDMNSYLKSVRTVIRQELSQIRTAARRELRRKVRWPLVARRVSDADIVGGRSMVSVHIIQDQPPFSGIKQTGRKSLKRFCRLVASQHMQLFVVFLLPTLGNI* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3472 651 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 224 646 IPR043367 GO:0008970
Mtr7g3472 651 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 28 220 IPR043367 GO:0008970
Mtr7g3472 651 Pfam Lipase (class 3) 306 442 IPR002921 GO:0006629
Mtr7g3472 651 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 224 646 - -
Mtr7g3472 651 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 28 220 - -
Mtr7g3472 651 Gene3D alpha/beta hydrolase 239 469 IPR029058 -
Mtr7g3472 651 CDD Lipase_3 260 438 - -
Mtr7g3472 651 SUPERFAMILY alpha/beta-Hydrolases 278 481 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3472 Mtr-Chr7 51702141 51705760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3472 78 647 Acyl Lipid Metabolism Gene Families AT1G02660 57.624 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3472 - - gmx:100807834 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3472 7 51702141 51705760 Mtr1g3166 1 42941328 42945065 PCT