Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3166 ATGGAAACTATGTGTTTAAAAACTGGGATTGTTCCTTCGATCTCCATTGGTGGATCTTTAGACACACGCGATACACGCGCCGCCGCATCTACCGTAAGTGCGGTGGGTCGTGAAAAATCTTCACAAAAATCATTATTTTCTAGATTTTCATTTAGATACCCATTGGAATCTCTATGGCCACAACGACGGAACAGAACGTTCAGTGGTTTGTCTCTAGACGACGCCGTTTTGGAAGATAACAGAGAAACAAAAACCGTTGGGGATGACGGTGAGGATTGTAGGGAGGGGCAGAGAGAGAATTGGGTTTTGAAGATTTTGCATGTCAAGAATGTTTGGAAAGGGGAACAAGGGAATCATGAAAGAGAAGAAACAATTACTGATAATGATGAAAACAATGGTGATGATGATCAAGTTTGTGATACTTGCGCGGTTGAAAATGATGATGACGAAAAAATAGATGATTTTGAATTTGATAGAAACTCGTTTTCCAAAATGTTGAGGAGGGTTTCTTTGGCTGAAGCTAGATTGTATGCTCAGATGTCACACTTAGGAAGCTTGGCCTATTCTATACCAAATATCAAGCCAGGGAAACTCTTAAAACATTACGGTCTGCGTTTTGTAACTTCATCGCTAGAGAAAAAAGAATTGGCAGCAAAATCTGAGAAAAATCCTCAGGAAGTTGAAAGTAAAGAGAAGCAAGAAGAAACAAAGGAGCCAAATAATGGTGGATATAGGATAAGTGCAACGGCTGCTTATAATATTGCTGCGTCTGCTGCATCTTATCTGCACGCACAGACAAAGAGTATACTTCCATTCACTTCTTCAAATGCAGCGACTGGTGAAGGAAGCAATGAAAGCCTTAACATGATGAACCCGGAAGTGGTATCTTTGATGGCGACTACTGATTCAGTGACAGCAGTGGTTGCGGCAAAGGAGGAAGTAAAACAGGCTGTTGCAGATGATCTAAACTCAACTCATTCATCACCTTGTGAATGGTTCATCTGTGATGATAACCAGAGTGGTACAAGATTTTTTGTTATTCAGGGTTCGGAGTCATTAGCATCTTGGCAAGCAAACCTACTTTTTGAGCCAATTAAATTTGAGGGTTTGGATGTCCTTGTGCACAGAGGTATATATGAGGCTGCTAAAGGGATATATCTACAGATGTTGCCAGAAGTTCATGCTCACCTAAAATCTCGAGGTTCTCGTGCAACTTTTCGTTTCACTGGACATTCTCTCGGTGGAAGCTTGGCACTACTTGTAAATCTCATGTTGTTCATAAGACAAGAAGTACCAATCTCTTCTCTACTTCCTGTGATAACATTTGGCTCCCCTTCCATCATGTGTGGAGGCGACACTCTACTTGAAAAGCTTGGTCTGCCGCGAAGCCATGTGCAGGCAATTATAATGCACAGAGACATAGTACCGCGAGCATTTTCTTGCAATTACCCTGACCATGTTGCAAAAATCTTAAAGGCTATCAATGTGAACTTTCGCAATCACCCATGTCTCAATAACCAAAAGCTACTATACACACCAATGGGTGAACTGCTGATTCTTCAACCAGATGAGAAATTTTCACCAAGCCATAATCTTCTGCCACAAGGCAGTGGTCTATATCTTTTGCATTGTCCTTTGTCAGAACCTAATGACACGGGCAAGAAGCTCCGAGCCGCAAAGTTGACGTTCTTGAACACACCTCATCCGCTTGAGATATTAAGTGAACGATCTGCTTATGGATCTGGAGGAACCATACAAAGAGATCATGACATGAACTCTTACTTAAAGACAGTGAGAAGTGTGATTCGCCAAGAACTTAACCAGATCCGTAAGTCAATGCGAGAGAAAAGGCGCAAGGTATGGTGGCCTCTTGTATTACCGCGACGAGTTGATACCAGCATTGTCGTTGGGAGGTCCATGGTATCGGTAAGTATTGGCCAACGCCAGTCACCGTTCTCTGGCATGATGAAGACAGGAAGAGAGTCCTTAAAAAGGTTTAGCAGGCTTGTTGCATCCCAACACATGCATTTATTTGTGTTGCTTTTCTTCCCTGCTAGGATGTTAATATTGGGGGCATATAGCTTGATTAGCCTTAGATGA 2100 0.4224 METMCLKTGIVPSISIGGSLDTRDTRAAASTVSAVGREKSSQKSLFSRFSFRYPLESLWPQRRNRTFSGLSLDDAVLEDNRETKTVGDDGEDCREGQRENWVLKILHVKNVWKGEQGNHEREETITDNDENNGDDDQVCDTCAVENDDDEKIDDFEFDRNSFSKMLRRVSLAEARLYAQMSHLGSLAYSIPNIKPGKLLKHYGLRFVTSSLEKKELAAKSEKNPQEVESKEKQEETKEPNNGGYRISATAAYNIAASAASYLHAQTKSILPFTSSNAATGEGSNESLNMMNPEVVSLMATTDSVTAVVAAKEEVKQAVADDLNSTHSSPCEWFICDDNQSGTRFFVIQGSESLASWQANLLFEPIKFEGLDVLVHRGIYEAAKGIYLQMLPEVHAHLKSRGSRATFRFTGHSLGGSLALLVNLMLFIRQEVPISSLLPVITFGSPSIMCGGDTLLEKLGLPRSHVQAIIMHRDIVPRAFSCNYPDHVAKILKAINVNFRNHPCLNNQKLLYTPMGELLILQPDEKFSPSHNLLPQGSGLYLLHCPLSEPNDTGKKLRAAKLTFLNTPHPLEILSERSAYGSGGTIQRDHDMNSYLKTVRSVIRQELNQIRKSMREKRRKVWWPLVLPRRVDTSIVVGRSMVSVSIGQRQSPFSGMMKTGRESLKRFSRLVASQHMHLFVLLFFPARMLILGAYSLISLR* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3166 699 CDD Lipase_3 328 486 - -
Mtr1g3166 699 Gene3D alpha/beta hydrolase 287 510 IPR029058 -
Mtr1g3166 699 SUPERFAMILY alpha/beta-Hydrolases 328 513 IPR029058 -
Mtr1g3166 699 MobiDBLite consensus disorder prediction 215 243 - -
Mtr1g3166 699 Pfam Lipase (class 3) 345 482 IPR002921 GO:0006629
Mtr1g3166 699 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 29 695 IPR043367 GO:0008970
Mtr1g3166 699 MobiDBLite consensus disorder prediction 116 135 - -
Mtr1g3166 699 MobiDBLite consensus disorder prediction 215 239 - -
Mtr1g3166 699 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 29 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3166 Mtr-Chr1 42941328 42945065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3166 1 699 Acyl Lipid Metabolism Gene Families AT1G02660 56.946 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3166 - - gmx:100807834 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3166 1 42941328 42945065 Mtr1g3166 1 42941328 42945065 ECH
Mtr7g3472 7 51702141 51705760 Mtr1g3166 1 42941328 42945065 PCT