Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3399 ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGTGTTTCAGGAAGAAGGACTTTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGCCAATATCTGATGTCTCTAGTGATCTTACCATCCAAGTAGGAGCATCAACCTATTCACTTCACAAGTTTCCTCTTGTTTCTAGGAGTGGAAGATTTAGGAAGCTGCTATCCGAATCAAAAGATTCTAAAGTTCCACGCGTTAGTCTTCCGACGGTGCCAGGTGGTGTAGAGGCATTTGAACTAGCTGCAAAATTCTGCTATGGAATCAATGTGGAATTCACGCTCTCAAATATTGCTATGCTATATTGTATATCTCATTTTCTTGATATGACTGAAGAATTCTCAGAAAAGAATTTGGTGACAAGAGCTGAATCATATCTAAAGGAAACGGTACTCCCAAACACATCAAACATTATACATGTTCTTCACCATTGTGAAAATCTTGTTCCTTTATCAGAAGAAATCAACCTTGTTAATAGGCTAATCAATGCAATTGCAAATAATGCATGCAAAGAGCAACTAACTTCTGGTTTGTTAAAACTTGATCACAACTTTCCTTCTAAAACATTATCAATGATGGAACCAGAGACACCCTTAGATTGGTGGGGAAACTCTTTCAACGTTCTCAGTCTTGATTTCTTCGAACGAGTTATATCGGTTATGAAATCGAAGGGATTAACACAAGAGTTGATCAGCAAAATTTTGGTAAACTATGCACATAATTCTCTTCAAGGGACTAGTAGTGTTAGTTCCCTTGACATAGAATTGCAGAAGAAACAAAGGGTCATTGTTGAAACTATTGTTCGCTTACTACCAACTCAATCTAGGAAAAGCTCAGTTCCAATAGCATTTCTTTCATGTTTATTGAAAACTGCAATAGCAACATTAGTATCAACTTCTTGTAGAAGTGATTTGGAGAGGCGAATTGGTTTACAACTCGATCAGGCAATTCTTGAAGACATACTTATTCCAACGAATTCACCTTCGAGTGCTCACAACACAATGTATGATATAGATTCAATTTTGAGGATCTTTTCTACTTTTCTGAATTTGGACGAGGTGGATGATGAAGACAGTGACTTCAGAGATGAAAATCAAATGATGTACGAGTATGAATTTGACAGTCCTGGATCTCCAAAACAAAGCTCAATTCTTAAGGTATCCAAATTACTTGACAATTTTCTCGCTGAAGTAGCACTAGACTCAAACTTGTTGCCATCAAAATTCATAGCACTTGCAGAACTACTTCCGGATCATGCCCGCGTTACAAGCGATGGACTCTATCGAGCTGTTGACATCTTCCTCAAGGTTCATCCAAGCATTAAGGACTCAGAGCGATACCGCCTAAGCAAAACAATTGATTGTCAGAAACTATCTCAAGAAGCATGCAGCCATGCCGCACAAAATGAAAGGCTACCAGTTCAAATAGGTGTACAAGTTCTTTACTACGAACAAATAAGGCTTCGAAACGCGATGAATGGAGGACACAATCAAATCTTGTTTGGTGGTATTCATGGTCAATTTCCTCAAAGATCAGGGAGTGGTATAGGAAGTGGAGCAATTTCTCCTAGAGATAACTATGCATCGGTAAGAAGAGAGAATCGAGAGCTGAAGCTTGAAGTAACAAGAATGAGAATGAGGTTGAATGATTTGGAGAAAGATCATGTTTCTATGAAGCAAGAGCTTGTGAAGACACATCCTGCACGCAAATTCTTCAAATCATTTGCCCAAAAATTAAGAAAGTTCAATGCTCTATTCCGTATTAACAGTATTCGTGGCAGTGGAACTGGGAGGTCTAGTCCACAACCACGGTCCCGGTTTCCTTTTCAAAAGAGAAGGTGCCACTCAGTTTCATAA 1890 0.3889 MGVVTLGELKPSVSGRRTFRPSSSIRHATEWPISDVSSDLTIQVGASTYSLHKFPLVSRSGRFRKLLSESKDSKVPRVSLPTVPGGVEAFELAAKFCYGINVEFTLSNIAMLYCISHFLDMTEEFSEKNLVTRAESYLKETVLPNTSNIIHVLHHCENLVPLSEEINLVNRLINAIANNACKEQLTSGLLKLDHNFPSKTLSMMEPETPLDWWGNSFNVLSLDFFERVISVMKSKGLTQELISKILVNYAHNSLQGTSSVSSLDIELQKKQRVIVETIVRLLPTQSRKSSVPIAFLSCLLKTAIATLVSTSCRSDLERRIGLQLDQAILEDILIPTNSPSSAHNTMYDIDSILRIFSTFLNLDEVDDEDSDFRDENQMMYEYEFDSPGSPKQSSILKVSKLLDNFLAEVALDSNLLPSKFIALAELLPDHARVTSDGLYRAVDIFLKVHPSIKDSERYRLSKTIDCQKLSQEACSHAAQNERLPVQIGVQVLYYEQIRLRNAMNGGHNQILFGGIHGQFPQRSGSGIGSGAISPRDNYASVRRENRELKLEVTRMRMRLNDLEKDHVSMKQELVKTHPARKFFKSFAQKLRKFNALFRINSIRGSGTGRSSPQPRSRFPFQKRRCHSVS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3399 629 Pfam BTB/POZ domain 37 123 IPR000210 GO:0005515
Mtr7g3399 629 Gene3D Potassium Channel Kv1.1; Chain A 19 165 IPR011333 -
Mtr7g3399 629 ProSiteProfiles NPH3 domain profile. 211 498 IPR027356 -
Mtr7g3399 629 Coils Coil 538 572 - -
Mtr7g3399 629 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Mtr7g3399 629 MobiDBLite consensus disorder prediction 602 617 - -
Mtr7g3399 629 Pfam NPH3 family 211 474 IPR027356 -
Mtr7g3399 629 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 619 - -
Mtr7g3399 629 SMART BTB_4 38 130 IPR000210 GO:0005515
Mtr7g3399 629 PANTHER OS12G0117600 PROTEIN 25 619 IPR043454 -
Mtr7g3399 629 SUPERFAMILY POZ domain 22 137 IPR011333 -
Mtr7g3399 629 MobiDBLite consensus disorder prediction 602 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3399 Mtr-Chr7 51063405 51067482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3399 1 448 EF-hand Containing Proteins AT2G47860 58.750 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3399 - - zju:107426026 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3399 7 51063405 51067482 Mtr1g3238 1 43656613 43661236 PCT