LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g3375	ATGAGAGGACCAGTGATGGTAAGTGGTGGATGCGGTGGTGTGAAGGGAAGAAGAGGAAGCCGAGACGGCAGCGAAGAAGTGTCGCCGGCAGCGTTAATGTTAGCTGCTTTGAAGAAATCAATGGTGGCCTGTAGTGTGGAGAGTCCTGATGATGTAATCTCCGCCGTTCATCATCCAATGGAGATTGGATGGCCTACAAATGTTAAGCATGTTAACCATGTCACGTTTGATCGTTTCAATGGGTTTTTGGGTCTTCCTCTTGAGCTTGAGGTTCATGTTCCTGCTCCTGTTCCTAGTGCTAGTGTTAGTGTGTTTGGTGTCTCAGCAGAATCAATGCAATGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTGTTACTGATGCAGGAGAGGTTATACTCACAGGGAGGATTAAAGGCTGAAGGAATATTTCGTATAAATCCAGAAAATGGCGAAGAGGAACATTTGAGGGAGCAATTGAATAGTGGCATTGTGCCAAATGACATTGATGTTCATTGCTTGGCTGGCTTAATTAAAGCATGGTTTAGGGAACTTCCTTCAGGAGTGTTAGATGGACTTTCACCTGAGGAAGTTCTTGAATGCAACACTGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTGAAACCAGTTGAATCAGCTTTGCTTAATTGGGCTGTTGATCTTATGGCTGATGTTGTAGTTGAAGAGGAGTGTAACAAAATGGATGCTAGAAATATTGCTATGGTTTTTGCTCCAAATATGACTCAGATGTCCGATCCACTAACTGCTCTAATGCATGCGGTCCAAGTGATGAATTTACTGAAAACACTGATACTGAAGACACTCCGAGACCGCGAAGAAACAGCAACAGCAGAATATTCATCCATGTCATCTCATTCATCAGATGAATATGACAGTCAACAAGAAATGTATACTAGCGGTGAATTGAAAAGAACCAAGTTAGATTATGATGATCATGTTGACTACAGCCACAACATTGAAGAAGCTGCATCTGCTCTCAGCGAGATAGAAGAATGCTTCTTAGAACAATTGGATGATGTTCAGACAAAACGATTCACAAAAGAAAAACCTGCAGAGCATTTGCAAGAAGAGTTAGAGAGTCCTACCAAAACTGAGGATTCCTGTCTGAGTTCTAGTTATAGAAACGGCTCGACAACAACTGAGGGATCAAATGCTGACACAAGTAGTCCATCAATAGAAAGTAAAAACACCAATGATGTGGAGATGGTAGATAAATTTAGTGATTCTATTTCACTCTTGCCTTTGTTTGCATCTAATTAA	1308	0.4151	MRGPVMVSGGCGGVKGRRGSRDGSEEVSPAALMLAALKKSMVACSVESPDDVISAVHHPMEIGWPTNVKHVNHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEESVELVKQLKPVESALLNWAVDLMADVVVEEECNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRDREETATAEYSSMSSHSSDEYDSQQEMYTSGELKRTKLDYDDHVDYSHNIEEAASALSEIEECFLEQLDDVQTKRFTKEKPAEHLQEELESPTKTEDSCLSSSYRNGSTTTEGSNADTSSPSIESKNTNDVEMVDKFSDSISLLPLFASN*	436

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g3375	435	CDD	CRIB	60	90	-	-
	Mtr7g3375	435	MobiDBLite	consensus disorder prediction	1	25	-	-
	Mtr7g3375	435	SUPERFAMILY	GTPase activation domain, GAP	103	281	IPR008936	GO:0007165
	Mtr7g3375	435	SMART	PBD_5	62	96	IPR000095	-
	Mtr7g3375	435	Pfam	P21-Rho-binding domain	61	89	IPR000095	-
	Mtr7g3375	435	SMART	RhoGAP_3	121	284	IPR000198	GO:0007165
	Mtr7g3375	435	PANTHER	MKIAA1688 PROTEIN	1	433	IPR044785	GO:0005096
	Mtr7g3375	435	MobiDBLite	consensus disorder prediction	293	311	-	-
	Mtr7g3375	435	MobiDBLite	consensus disorder prediction	292	311	-	-
	Mtr7g3375	435	MobiDBLite	consensus disorder prediction	365	416	-	-
	Mtr7g3375	435	MobiDBLite	consensus disorder prediction	365	379	-	-
	Mtr7g3375	435	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	107	288	IPR000198	GO:0007165
	Mtr7g3375	435	MobiDBLite	consensus disorder prediction	380	413	-	-
	Mtr7g3375	435	Gene3D	Rho GTPase activation protein	94	286	IPR008936	GO:0007165
	Mtr7g3375	435	ProSiteProfiles	CRIB domain profile.	62	75	IPR000095	-
	Mtr7g3375	435	Pfam	RhoGAP domain	124	258	IPR000198	GO:0007165
	Mtr7g3375	435	Gene3D	CRIB domain	57	93	IPR036936	-
	Mtr7g3375	435	PANTHER	RHO GTPASE ACTIVATION PROTEIN-RELATED	1	433	-	-
	Mtr7g3375	435	CDD	RhoGAP	124	274	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g3375	Mtr-Chr7	50891713	50894900	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g3375	-		K20642	gmx:100812700	614.764

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr7g3375	7	50891713	50894900	Mtr1g3254	1	43825600	43828790	PCT