Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3359 ATGGAGGATCAACAATCTAGGTTTGAATTGTTTGAGAAATTCTCATGGAAGGTTGAGAAATTCGCTCGAGTGAGCAGCATCCAGAAGGTTTACTCCGAGCCTTTTGTTCTTTGCGGCTATCCATGGAGGATTCTTGTTTACCCATATGGGAACGGGGACAATACAAACAGCATGTCAATTTATTTGGATACTATGCAATCTCCCAATTCTTATCAGGGAGGGACCAGAGATGTGACATTTAGGCTTGTTGTATTTAATCAGTTCGATAGCACCATGTCAATCAAACAACAGACTCATCATGTGTTCAGTGAAAGGGAGAGAGACTGGGGTTTCACATCTTTCATGCCTTTAGTTGAGCTTCATAATCATCGCCTGGGGTTTATTGTGAACGATAGTTGTATTGTTGGTGCTGAGGTTTATGTTCACAATTCAAGATATGAGAATGAAATGAATCGGACCGGTAACTTAATGGCTTCACTATTATCTAACTCCATAACATATGGTAGTCATATTAGTGGTGGACATATGGAAGTCCCAAGGCCTGAAGCCCAAGTCCCAAATCTGGAATCTCTTTCCGAATTTCCTATATTAGTTCGTACTGAGCCTACAAGAGACATTGACATGGAATTTTTCAAATACTCAATTGGTGAGCTTATGGATTTCATGGGTTTAGGGCAAGTGGAAACGTATTTTGTTCCACTACTAGAGAAAGCATGTTCTCAACATCCTTCACTCATTGAGTGTCAGCAGAGGAGAAGTCGCAGGTTCACTGAATGGGCTTTCACCGCTTTGGGCAGAGTTCTTTATTTCCTTAAGACTAGAAAGGCGAAAGACATGAATGATCAAGCTTGCAAGGATCTTCAAATTTTATGGGAGGAACTTGAGATATTTGGATTTGATCTGGCTTGGCTAGAGCCTCATGTTCAATTTGCTTTAAGAATGAAAAGTTACGTGGAGAAAGATGTGCAGATGGAGATGCTGAAGGAGAATGCGGAAGGTATAGCGTTGGAAATGGAGAGGCTTAAGACAAAATTGGCTACTCTTGAGGTAGATCTTAACATAGCAAGAGACTTGTTGATGGAAGAAGGCTTCAATGGGATAGATTTGAATGTTGAACTAGGATATGGGATACCATAG 1137 0.4072 MEDQQSRFELFEKFSWKVEKFARVSSIQKVYSEPFVLCGYPWRILVYPYGNGDNTNSMSIYLDTMQSPNSYQGGTRDVTFRLVVFNQFDSTMSIKQQTHHVFSERERDWGFTSFMPLVELHNHRLGFIVNDSCIVGAEVYVHNSRYENEMNRTGNLMASLLSNSITYGSHISGGHMEVPRPEAQVPNLESLSEFPILVRTEPTRDIDMEFFKYSIGELMDFMGLGQVETYFVPLLEKACSQHPSLIECQQRRSRRFTEWAFTALGRVLYFLKTRKAKDMNDQACKDLQILWEELEIFGFDLAWLEPHVQFALRMKSYVEKDVQMEMLKENAEGIALEMERLKTKLATLEVDLNIARDLLMEEGFNGIDLNVELGYGIP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3359 378 SUPERFAMILY TRAF domain-like 13 144 - -
Mtr7g3359 378 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 357 - -
Mtr7g3359 378 SMART math_3 16 120 IPR002083 GO:0005515
Mtr7g3359 378 Coils Coil 324 358 - -
Mtr7g3359 378 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 357 - -
Mtr7g3359 378 CDD MATH 13 139 IPR002083 GO:0005515
Mtr7g3359 378 Pfam MATH domain 20 140 IPR002083 GO:0005515
Mtr7g3359 378 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 155 IPR008974 GO:0005515
Mtr7g3359 378 ProSiteProfiles MATH/TRAF domain profile. 11 139 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3359 Mtr-Chr7 50726009 50728740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3359 - - mtr:MTR_7g107200 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3359 7 50726009 50728740 Mtr7g3359 7 50726009 50728740 ECH
Mtr7g3359 7 50726009 50728740 Mtr1g1520 1 18850225 18872539 PCT