Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3195 ATGGAGTTTGGAGAAACAGAGAAAAAAGAGGTTAATTCACAGATTCCATGGCTACCCACCACACCATATAAGCCAATTGCTCAAAGACCAGTGCCGATCTACACTCCTGGAGAGAGAAATCAGCTCAACTCTCATATCAATGGTGAATTTGCATCTTTTGAGTCTTCAAGTGGTGGAGGTGTTAACCACCGTCCAGAATCTGTGGCTGTAACATTAAACATTGGTCATGACAATGCCAGAACTCGGGTACCGATATCGTTCGATAATCCGAGCTCTAGTAATAGTTTTGCTGAACTTTTGGCTCAGGCTGAGGCTCCTTCATCAGCAGCATATTGCAATTCACCATATGGATATTTGGGGGACCAATTTGTTCCTGGTGTGTTGAACTTGAACCCACGGTTCAACCAAAGTTATGCATTTCTTGGCCAGCACAATCTTTATCAGCAACAACTCTTCAACAATTTCATATGTGACAATTACCAAGATCCTCAGGGCACACCGCACTTGGCTTATTATAACAAGACCAATTCCCAGGTTGCTCTGCCTCCAGAAAATAACATAACATCAAACGACAATCAAGTTGTGGAGACACAAATAAACATGGAACAAAGGGATCAAAGGGATGATGAGAGTAATGCCTCAGCCACTATGTGCAACAGTTCACACAACAAACTTTATGACCCTGTTGTAGACTTGACTTCTGTTTCTACACCAAGCAAAGAGAATAAGAACCACAATAAGGAAATACACCATGTTATTGATCTTAATGAAATACCCCAAACAAAACCAAAAAGAAGAAAGCATCGCCCCAAGGTCATAAAAGAAAGCAAACCCAAAAAAACTCCAAAGCCAGCCACTCCAAAGCCTGATCAATCAAAAGAGAACTCAACTCAAAAGAGGAAGTATGCAAGAAAGAAAGAATCAAATGCAACTCCAGCAGAAGTGACAGGGCAATGCACTGAACCTTTGATGTCAGAGTCTGCCAAAAAGACATGTAGAAGGTCCTTACACTTCGACATTCCAGAGCAACCAACAGATGGAAATTCTGCGTGTAGGGAAGAAAATGCAACTAGACATTTTGGTGGAGAAATTAGCATAGAGGTTCAGGAAACACACGTGTTAAATAATCACATGACATTACAAGAAGATGCACAAGCCTCCAGCAGTAGCAGAAAACTTTCAAGTTCAGGGTCACAAGAATTTGGTTCCAAGAAAAAGCCGTCTGCTACCACTAAGCAAGCAGACAACGGCAGCATTAATCTGCTTGGGGCACAATATAATCAAATGCAGGCATACCAATCAAAGTATTGGCTTCAATTTCCGAATGTTCAGAAGAAAAAGAGAAGTGAGAAGGGGAAATTTTCAAATATTCCCAATACATCTTCAATGAATGCTGCTCAAGATGTACAGCTTCCAACATGTTCTGAAGAAAATGCTAGATCACATCCGGATGCATCAACTTCTAATGTGTGGACTACTGCTTCTGCTTCTGAATATGAAACAGCGCAACTCCTAACCATGCTCAAAGTTACAGAAATAGCCACCCATGACAAATCTCGATCACTCGAGTACAATTTATTTTCAGGACAGAGCAGACCAACCAAAAAAAGATCGAGAGTCACTACCAGAGCTCATGATTATACTTCTCTGAGCAAAATTACAAACTATGATGCCAAACTAACTAATATTGTGAACCGAGGCAGTTCGGAAAGACAAACATTTGAGGATGCAGAAAGACCACAAACAGGCATTGATGCTCTAGTTGCGGAGATGCGTGCATCGCTCACAAAAAAGAAACGAAGTAAAAAGAGAAGTACTCCAATCAGTTCTACATATTCTTGCCTAAATGAAATGCAACATCATCTGCCCTTGCACAACTCATTAGGTGTTGCTTGCGGAGAGAGCTGGAAAAACATACCTACTGTGGACAGATTAACACAGCAGTTTAGCCACCTAAGCATATATAGAGAAGCTAGAGAGCTTGTATTATACGGGCAGAATGCACTTGTCCCTTACAACCGGCAAAATGAAAAACGCAAAGGTCGGGTTCATGAAAATGGCACCATCATTCCCTACGAGGGCATGTTTGATCCCATCAAGAAACAGCGCCCACGACCTAAAGTTGATCTTGATGAGGAAACCAATAAAGTGTGGAAGCTTCTGATGTTGGATATAAATAGTCATGGGGTTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAAATGAACGAAATGTTTTCCGAGGAAGAGCAGAGTCATTTATTGCACGGATGCATCTTGTTCAAGGAGACCGACGCTTTTCTCGATGGAAAGGATCAGTGGTGGATTCGGTGGTTGGAGTTTTTCTCACTCAAAATGTCTCAGACCATCTATCTAGTTCTGCATTCATGTCTCTCATTGCTCGATTTCCCCTAAAGTCAAGCAGCATGTTCGATACATGCCACGAGGAAAGTGCAAGCATGATAGTCAACACACCAGAGGTGCAAATTGTGGAACCAGAAGAATATGCAAAGCTGGATGAAATAATATTGAATCAATCTGTTCAAGAGTTGAGTTCTATGACAAAAGACATCATTGAACATTCTGAAGAAAGAGAAACTGTTGACAGCAACAGCATTGATTCCTGTGGAACTACTGGCAGCCTAGATAGCTTAAAAGATGTATCAAATTGTAAACTGTCAGAACCAGCTCAAAGAAATATTATGGAACATGGTACAATGGAATTTGTTAATCCATTGACTGGGAAAGGTCAAGAAAATTCATGTCATGGGGGTATTAGGAAAGAGTCCAATGTTTTATTTTCACCCAATTGCTCCATTGTTACATCTCAGTTGTCTGGAGATTTTTCAATTGATCAAAATCCTGAGAAGATAGGATCATTCTCAGACAGCAACACAGAAGTAGAAGATCGGTTAAGCACAGCTGAATACAATTTTTCCAACAGGACTTCTTTCAGTAAGCTTTTAGGAATGGCAAATTCGACCCAGTTACATGAAGTTAACAGTCAGAGAAGCAATCCAACTGAGAATTTGAGAGATTTATATGGTCAATCTGTAGCTATGAGGCATGACAACTTGGAAGAGAACTTGGAAAAATCAAATGTTACTCAAAGCTCCTTAGAAGCAATCATGAAGCAATTCAATGGCCATAATTTGAAAATGACCCCCAACTCTGAAGTCCATGAAGTCAACTTCTATAACCCTCTCAATGTTGAAGCCTCATCAAGTGGCTCCTCAAAGAATACAAATGAAAATAACAAAAGCTCTGGTACTCCAACGGAGTCTGAAAGCCAAGCTGCAATTACCCACTCTCACAGCATGCTATCCCAAGTCCCTCTTCAGCAACATAGCGATCACCAGCAGCACAAAGTTTTCCACATTTCTGGACAAAGTAAAGATCTTATGGAGAAATCAAAGGAATCAGATTTTGGTGACCACAACTATGCCTTGAGGAATGAAAACAGTAAGTTAGATTCTGCCCCTGTAAAAAAATTAAAGGGCAAGGAGCGTGGGAAAGAGAAGAAGGATAACTTCAATTGGGATAGTTTAAGAATACAGGCACAAGCTACGGCTGGGAAGAGAGAAAAGACAGAAAGCAACATGGACTCATTGGACTGGGAAGCTGTGAGACGGGCAAACGTCAAGGAAATTGCTGATGCAATCAAAGAGAGGGGCATGAACAACATGCTTGCTGAACGCATTCAGAGTTTCCTGAATCTACTCGTTGAAAAACACGGGGCTATTGATCTCGAGTGGCTTAGAGATGTTCCACCTGACCAAGCAAAAGAATTCTTGCTCAGCATAAGGGGATTGGGATTGAAAAGTGTGGAGTGTGTGCGACTATTAACACTGCACCATCTTGCTTTCCCGGTGGACACAAATGTTGGGCGTATTGCAGTGCGATTGGGATGGGTACCTCTCCAGCCATTGCCCGAGTCACTACAGTTGCATCTTCTAGAATTGTACCCGGTGTTGGAATCCATACAAAAATATCTCTGGCCCAGGCTGTGCAAGCTTGACCAAAAAACATTGTACGAGTTGCATTACCAGCTGATTACATTTGGAAAGGTCTTCTGCACAAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGAGGGGAATGCAGACACTTTGCCAGCGCTTTTGCTAGTGCAAGGCTTGCCTTACCAGGACCGGAGCAGAAGGAGCAGAAGAATTTAGTTATCACAACTGGAAACAATGCAACAGATCAGAACCCATCAACAACCGTCAATCAGTTGCCTTTGTCTCTCCCAGGACTGGAGCAAAAGAACATTGAGATCACAACTGGAACCGATGCAACTGATCAGAACTCGTCAGTCGTCATCAATCAATTGCCCTTGTCTCTCTCTGAAAACAAAAACCAAACAGAAGAACTTCAACAAACAGTAGCGATCAGGCAACTTGAAATGAATTCTGAAATCAATAACTGCCAACCCATTATTGAAGAGCCAACGACTCCAGAGCCAGAGTGCTCCCATGTATCTGAAAATGATATAGAGGATTTTTTCTATGAGGAATCAAATGAAATTCCAACCATCAATCTAGACATAGAAGAGTTCACTTTGAATTTACAAAATTATATGCAAGAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTCTAAATCAAGAAGCTGCTTACATTCCTACAACGAAGCTGAAGAACGTGAGTCGGTTGCGCACAGAGCATTCTGTTTATGAACTCCCAGATTCTCATCCTCTTCTGGAAGGGTGGGAAAAGCGAGAACCTGATGATCCAGGAAAATACCTTCTAGCTATATGGACGCCAGGTGAGACTGCAAATTCTATACAGCCACCAGACAGAAGATGCAGCGCTCAAGATTGTGGCCAACTCTGTAATGAGGAGGAATGTTTTTCGTGCAACAGCTTCCGTGAAGCAAATTCACAGATAGTTCGAGGGACAATCCTGATACCATGTCGAACAGCTATGAGAGGGAGCTTTCCGCTAAACGGAACCTATTTTCAAGTCAATGAGGTTTTTGCAGACCATGAATCAAGTCTTAATCCGATTAGCGTTCCCAGAAGTTTGATATGGAACCTTGATAGGAGGACAGTGCATTTTGGAACCTCCGTAACAAGCATATTCAAAGGTTTAGCAACACCAGAAATTCAACAGTGCTTCTGGAGAGGGTTTGTCTGTGTGCGGGGCTTTGAAAGGTCAACGAGAGCACCCCGTCCTTTAATGGCAAGACTGCATTTCCCAGCAAGCAGGCTGGCCAAGAACAAAAAAGACTCCGCTGCGGCTGCGGCCAACTCGCAGGGATCAAATTCAAACCCAAATGCAGAACAGCAACAGCCAGATTTTCTTGCCAGCATTCCCAACCTTCGACAGAATGGTGGAACCTGA 5406 0.4219 MEFGETEKKEVNSQIPWLPTTPYKPIAQRPVPIYTPGERNQLNSHINGEFASFESSSGGGVNHRPESVAVTLNIGHDNARTRVPISFDNPSSSNSFAELLAQAEAPSSAAYCNSPYGYLGDQFVPGVLNLNPRFNQSYAFLGQHNLYQQQLFNNFICDNYQDPQGTPHLAYYNKTNSQVALPPENNITSNDNQVVETQINMEQRDQRDDESNASATMCNSSHNKLYDPVVDLTSVSTPSKENKNHNKEIHHVIDLNEIPQTKPKRRKHRPKVIKESKPKKTPKPATPKPDQSKENSTQKRKYARKKESNATPAEVTGQCTEPLMSESAKKTCRRSLHFDIPEQPTDGNSACREENATRHFGGEISIEVQETHVLNNHMTLQEDAQASSSSRKLSSSGSQEFGSKKKPSATTKQADNGSINLLGAQYNQMQAYQSKYWLQFPNVQKKKRSEKGKFSNIPNTSSMNAAQDVQLPTCSEENARSHPDASTSNVWTTASASEYETAQLLTMLKVTEIATHDKSRSLEYNLFSGQSRPTKKRSRVTTRAHDYTSLSKITNYDAKLTNIVNRGSSERQTFEDAERPQTGIDALVAEMRASLTKKKRSKKRSTPISSTYSCLNEMQHHLPLHNSLGVACGESWKNIPTVDRLTQQFSHLSIYREARELVLYGQNALVPYNRQNEKRKGRVHENGTIIPYEGMFDPIKKQRPRPKVDLDEETNKVWKLLMLDINSHGVDGTDEDKAKWWENERNVFRGRAESFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLIARFPLKSSSMFDTCHEESASMIVNTPEVQIVEPEEYAKLDEIILNQSVQELSSMTKDIIEHSEERETVDSNSIDSCGTTGSLDSLKDVSNCKLSEPAQRNIMEHGTMEFVNPLTGKGQENSCHGGIRKESNVLFSPNCSIVTSQLSGDFSIDQNPEKIGSFSDSNTEVEDRLSTAEYNFSNRTSFSKLLGMANSTQLHEVNSQRSNPTENLRDLYGQSVAMRHDNLEENLEKSNVTQSSLEAIMKQFNGHNLKMTPNSEVHEVNFYNPLNVEASSSGSSKNTNENNKSSGTPTESESQAAITHSHSMLSQVPLQQHSDHQQHKVFHISGQSKDLMEKSKESDFGDHNYALRNENSKLDSAPVKKLKGKERGKEKKDNFNWDSLRIQAQATAGKREKTESNMDSLDWEAVRRANVKEIADAIKERGMNNMLAERIQSFLNLLVEKHGAIDLEWLRDVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQKTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKEQKNLVITTGNNATDQNPSTTVNQLPLSLPGLEQKNIEITTGTDATDQNSSVVINQLPLSLSENKNQTEELQQTVAIRQLEMNSEINNCQPIIEEPTTPEPECSHVSENDIEDFFYEESNEIPTINLDIEEFTLNLQNYMQENMELQEGEMSKALVALNQEAAYIPTTKLKNVSRLRTEHSVYELPDSHPLLEGWEKREPDDPGKYLLAIWTPGETANSIQPPDRRCSAQDCGQLCNEEECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHESSLNPISVPRSLIWNLDRRTVHFGTSVTSIFKGLATPEIQQCFWRGFVCVRGFERSTRAPRPLMARLHFPASRLAKNKKDSAAAAANSQGSNSNPNAEQQQPDFLASIPNLRQNGGT* 1802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3195 1801 Coils Coil 1525 1545 - -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 1072 1124 - -
Mtr7g3195 1801 SUPERFAMILY DNA-glycosylase 750 1381 IPR011257 GO:0003824|GO:0006281
Mtr7g3195 1801 Gene3D - 1288 1376 IPR023170 -
Mtr7g3195 1801 SMART ccc3 1359 1379 IPR003651 GO:0051539
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 277 308 - -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 382 415 - -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 262 276 - -
Mtr7g3195 1801 SMART endo3end 1186 1358 IPR003265 GO:0006284
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 311 325 - -
Mtr7g3195 1801 Pfam Permuted single zf-CXXC unit 1619 1650 IPR028924 -
Mtr7g3195 1801 Pfam RRM in Demeter 1653 1753 IPR028925 -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 241 261 - -
Mtr7g3195 1801 CDD ENDO3c 1206 1324 IPR003265 GO:0006284
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 1072 1119 - -
Mtr7g3195 1801 PANTHER ROS1, PUTATIVE-RELATED 382 1107 - -
Mtr7g3195 1801 PANTHER ROS1, PUTATIVE-RELATED 291 357 - -
Mtr7g3195 1801 PANTHER ROS1, PUTATIVE-RELATED 1423 1763 - -
Mtr7g3195 1801 PANTHER ROS1, PUTATIVE-RELATED 1 290 - -
Mtr7g3195 1801 PANTHER ROS1, PUTATIVE-RELATED 1137 1427 - -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 1766 1801 - -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 1760 1801 - -
Mtr7g3195 1801 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 290 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr7g3195 1801 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 291 357 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr7g3195 1801 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1423 1763 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr7g3195 1801 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1137 1427 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr7g3195 1801 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 382 1107 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 202 222 - -
Mtr7g3195 1801 Gene3D Hypothetical protein; domain 2 1186 1287 - -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 448 489 - -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 234 325 - -
Mtr7g3195 1801 MobiDBLite consensus disorder prediction 454 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3195 Mtr-Chr7 48920351 48930560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3195 - - mtr:MTR_7g103680 3463.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3195 7 48920351 48930560 Mtr7g3195 7 48920351 48930560 ECH
Mtr7g3195 7 48920351 48930560 Mtr1g2076 1 30685933 30697117 PCT