Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2076 ATGGAGGTAGGTGAAAATGATAGAAAGAAGCCAGAAGCAGAGATTCCATGGATCCCTTCAACCCCTGTTAAACCAGTTGTGCCAAAATCAGCTCCGATCTGTACTCCAAAAGCTAATGGAGCATTTGCATGTCTTGAATTCTCACATGGTGGAGAGAAAAACAGAGAATCCCATGATGGGATTGTACCTGCGGCTGCAATTACAGACATTGGAGGTGAAAATGAGGCGGCTTCGGCGAATTCTTATGCAACACAGCTAGGAAACATTAATGGATTGAATGATCTGTTTGTCTCTTCGGTTATCTGTGACAATTCGAGGGATCCTCATGGACATGAAACATCCGATAATGCTTGTTGTAGCAAGAGAGATTATGAGGATGACCCTGCCAAAAAGCTTGACAAGGATGGAACTCCACCAAACAAAGAGCTCTATGACCCTGCCGTAGAATTTGCTGCTGTTTCTTCACAACTGAAGGAGATTTACAACCCAGATGAGGGAAACAGTCTCTGTACTGGTCTGAATAAAACACCAGAAAAAAAGCCAAGGAGAAAAAAGCACCGCCCCAAGGTCATTAGAGAAGTCAAACCCAAAAGGACTCCGAAGCCAGCTACCCCAAAGCCTGCTCAAGCAAAAGAAAACACAACCGGCAAGAGGAAGTATGTGAGAAGAAAAGGATTGAACACTTCTACTACTCAAACAGAAGTGACAAGTGAATTAGCTGAAAAAACACCTGAAGCTACCAAAATGTCATGTCAAAGGTCCTTAAATTTTGATATAGGATCAAAAGACGAGAGTTCTACAGGCAGAGAAAATGAAAATCCAACTGCACTTTTAGATGGTGTAGCCGTACAAGAAACCAATCTCGGCCCTGTCTGTGATTTAAACACTTCGGTTAAGCATGCATCAAGCGGTTCCATGTCATTACCAGAAGATACACAAGCCCCAGATACATCTTCACAAAGCACCAGCCCCGGGGAAAAGTCAAAAGAAAACCCAACGGGCAAGAAGAAACGTGTGAGAAGGAAAATGAACAAGACTTCTGCCCCTTCAACAGAAATGACAGGTGAATTGACTACAGAAAAGATGTGTGAATTGGCCAAACCAACCAGTAAAAGTTCCATAAATTTTGACAAAGGAGGAGTGGAAGAGAGTTCTGCAGTCAAAGAAAATGCAACTATACACCTGAGCAAAGAAAATGAAGTCACAGATCGAACAAATCCAGACGTTCCATTAACAGAAGACACACAAGCCACAAAATCATCTTCAAGAATGCCCCATGAAGCAAAGCCAAAAAAAAGCCCAGGTGTCAAAAGGCAGTATGTGAGACGGTCGGGATTGAACAAGTCTTCCACTCCTACAGAAGTATCCGGAGACTTGCCTGGAAAAGTGATGCCAGAATCTGCCATAACTTCTTGTAGAATGTCCATAAATTCTGACAGAGGAGCAAATGATGAAAGTTCTGCAGATAGAGAAAATGGAACTGTGCACTCGTGCAATAAAACTGGAGCAGAAATTCAGGAAATTGATGTAGGCCTTTCCGATGATATCCAGACTTTTATGAACCCGGCAGTAGAAAATAATTACCTGTCATTTTGTAATAATGAACAAACTCCAACTGTGCATCCGTGCAAAGAAACTGCTGCAGTAATGCAGGAAGTTGATGTAGGCATTTCCTATGATATGAAGACTTTCATGAATCAGGCAACAGAAAGTAATTACATGTCATTTTGTAGTAATGGACAAACCTCAAGTACATCCCCGTCACAAACCAACCCCCTTGGGGATAAGTCGAAAGAAAAGCTGACTGGAAACAAGTATGAGAGAAGAAAACGGTTGAACAAGTCTCCTATTTGTCAAACAAAAATGACAGGAGAACTGACTGGACCAATGATGCCAGATTCTAAAGAAACGCCAATGAGAAGGTTCTCGGATTTTGACATGGGAACCGAAGATGAAAGTTCTGCATGCAGACAAGTTTTAAATGTGCATATTGGCGACACAGTAGAGGAAACACCTGCAGGCCTTGCCTATAATAAAGATACCTGGATGAAGCAGGCATTACATAGCTACATGCCATTACCTGAAGGCGCACAAACCCCGAGTACATGTCCTTCAAAAGGTAATCATCCTGGAGCAAAGCCAAAAGAAAACTCAGATGGCGATAAGAAGTGTGTAAGAAAGAAGAGATCGAAAATGACTTCTACTCCAACAAAAAGGACAGGTGGATTGACTGAACCAATTATGTCTGAACCTACTACAATATCATGTAAAATGTCCATAAACTTTGACAAAGGAGGAAGAGATGAAAGTTATATGTGCAACGAAAGCCTGACCAGCGATCAAAACACCCTGGTGAAAGAGATATTACATTATTGCGCGTCATTATCTGAAAACACACAATCTCCAAGTACATGTCTTCCCGAAAGCAATCCTCCTGGGGAAAAGCAGAATGCCAGGAACGAAAACAAAAGAAAGGGCCTCGCAACTGCTGAGGATGGAAACATCAGTAACAGTCAAGTTTCAACAATAAAGTTACAAATGGTTGGTTGCGAGAGAGAGCATGCTGGAACCATTGAACATGCAGATAACAGCAGCATGAATCTAATTGGCGCACACTATAATGGATTGGCCTCATACCAGTCAAAGTTTCCGCTTCAATTTTCAAATATCCAGAAGAAAAGGAGAACTGAGAAGGGGAAAACTTCCAATTCTCATATTACATCTTCTGTGATTACTGAAAATGGAGCACCACTAATATTCACTCCCGAAGATGCTCAAATGCATCCTTATGCATCAAACTACAACTCTTGGATGTATGGTTTTGGATATAATGCACCTGTATTCCCAATCATAAATGAATATAGAGAAAATTATATCCATAATACTCAAACATTTGATGAGTTCAGATTATCTTTGAGAAGGGTGACAGAAAAATCTCAATTCCCGGCTGAAACTTCTGATTATAATTCGCTAACGAGAATTAGAAATTTTATCGAACCAAATTATACAGCAAATCAGCTGGATTTTTCAGACCAACAAGCAATGAGAGATGCAGAAAGACCTCAAACATGTATTGACGTCTTAGTTGAAGATGTGCCTGTATCAAGTGTAAAAAAGAAGCAAAATAGAAAGAGAAGTGCTCTTTCCAGTTCAGCGCATCCCAACACAGATCAGAATCAGATGCAACAGTGCCATAATGTTGCCTTGGGAAATCACCACTTGGCACTAGGGAAGTCATCAGGTACTGCTCGCGGAGGAAGGCGGAAAAAAGTGTATGATGTTGAAGCATTAGTTAAGCAATTTAGACAGCTAAACATAAACGCAGGAGTGGGAGACATTGTCTTATACAAGCAGAATGCACTTGTTCCCTTTCAGGGCTCATTTGATCCCATAAAAAAACAGCGTCCACGACCGAAAGTTGACCTAGATGAGGAGACTGATAGAGTGTGGAAGCTTTTGCTGTTAGATATAAATCATGATGGGGTTGATGGAACAGATGAAGAAAAGGCCAAATGGTGGGAAGAAGAACGTAAAGTGTTCCGTGGGCGAGCAGACTCATTTATTGCACGAATGCATCTTGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTTGTAGGAGTTTTCCTCACTCAAAATGTCACGGACCATCTTTCCAGCTCTGCGTTCATGTCCCTTGCTGCTCGGTTTCCCAAAAAGTCAGGCAGCACAGCTTGTGACGGAGAAGGCACAAGCCAAGCGGTCAACAAACAACAAGTGGATATAGTGGAACCGGAAGAGAACACAGAATGTGATGTGAACTTATTGAATCAATCTGTTTGCAACCAGAGTTCTATGACAAAAGACATAATTGAGCATTCTGGAGAAAAAGCTGTCAGCAGCAATGATTCCTGCAGAATTACCAGTAGCCCAATTAGCCTAACAGATGAATCAAACTGCAAACTAACAGAATCATCTCAATCCTCTGGTCCAATGGTTATGATTGAGGAAGGGGAAGAAAAATCATGTTATGATGGTGCTGGGAAAGAGTTAAATGACATAGTTTCGTCCCAATCCTCTGTCATTTCATCTCAAATATCTGGAGAGTTTTCAAATGATCAAAATCCTGAGAAGATAGGATCATGCTCAGATAGCAACTCAGAAGTTGAAGATCTGTCAAGCACAGCAAAGTACAACAGTGTTGAAGATCTGTCAAGCACAGCAAAGTACAAAAATTACGGTTCTTTCTGCAAACTTCTTGAAATGGTAAGTTCAACCAAGTTTTATGAAATTGAAAGTCAAAGAAGCAAATCAACTGAGAACATGAGAGATGTCACTCACAGCTCTTTGGAAGAATCCATCATCCCGTCCCATGAATGTAATTTGAGACTCACCCACAACTCTGAAGCTCATGATCCTTTCAAAGCAGAAGCTTCATCAAGTGGCATCTTAAAGAATAAACATGAAAATGAGATGAATACACCTAGTTTTCAAACAGCCAAGTCTGCAGGCCTTGTTGAGGTTACTCATTCTCAAACTATTGCATCTCAAGTCCATCCTCAGGAACAGACTAATCACATGCAGCAAAACTTTTTCAACAGTTCTGGACAAACTCATGATCTGATTCAGAATGAAAGGTATTTAAACCTTGGTGATCACAAAGATGTTGTGAGGAGTGAAACCAATGAGATAAGTTCTACCCCAATAAAAGTAAAGACCAAAAGTCAATTAAAGGAGGAACAGGAACAATTTGACTGGGATAGTTTACGAATAAAAGCACAAGCTAAGGCTGGGAAAAGAGAAAAGACAGAAAACACCATGGATTCTTTAGACTGGGATGCCGTGAGATGCGCAGATGTCGGTGTAATTGCTGATGTTATCAAAGAGCGGGGCATGAACAACAGGCTTGCCGAGCGTATTCAGAAATTCCTGAATAGGGTGGTTGATGATCATGGAAGCATTGACCTCGAGTGGCTGAGAGACGTTCCACCTGACCAGGCAAAAGAATATTTGCTGAGCGTAAGAGGACTGGGATTGAAAAGTGTGGAGTGTGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTAGACACAAATGTTGGACGTATAGCAGTACGCTTGGGATGGGTGCCTCTCCAACCACTACCCGAGTCACTACAGTTGCATCTCCTAGAAATGTACCCGGTGTTGGAGTCCATACAAAAATATCTTTGGCCTCGACTGTGCAAGCTAGATCAAAAAACATTATATGAGCTACATTACCAGATGATTACATTTGGGAAGGTCTTCTGTACAAAAAGCAAACCAAACTGTAATGCATGCCCGATGAGAGCAGAATGTCGACACTTTGCAAGTGCATTTGCTAGTGCAAGGCTGGCCCTGCCTGGACCAGAGCAGAGGAGTATGGTTAGTGTATCTGGAAACGGTGTGACTGATGAGAACCCACCTGTAGTCATGAGTCAGTTGCACTTGCCTCTTCCTGAGAACACAAACCAAGTGGTGGAAGAAATTCCCGAAACAGAAGTGAGTGGACAACTGGCAAAATCTGAAGTGAATATTTGCCAACCTATCATTGAAGAACCGACAACACCAGAGCCAGAATGTTCGCAGCTAGAACTAAGTGATATGGAGGATGCCTTCATTGATGATCCATGTGAAATTCCCACCATTAAGCTTAACATGGAGGAGTTCACTCTTAATTTACAAAACTATATGCAACAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCTCTGGTTGCTTTGCATCCAGAAGCTGCTTCCATCCCTGGGCCCAAGCTAAAGAATGTTAGCCGATTACGAACAGAGCATTGTGTTTACGAACTCCCGGATATGCATCCTCTTCTGGAAGGGTGGGAAAAACGAGAACCCGATGATCCTGGAAAATATCTTCTTGCTATATGGACTCCAGGAGAGACGGCCGATTCAACACAGGCACCTGAGTGCAAATGCAACTCTCGCGAAGAATGTGGACAGCTTTGCAACGAGATGGAATGTTTCTCATGCAACAGTTTCCGTGAAGCAAATTCACAGATAGTCAGAGGCACACTTCTGATACCATGTCGAACAGCTATGCGTGGGAGCTTTCCACTTAATGGCACTTATTTCCAAGTCAACGAGGTATTTGCTGACCATGGGTCTAGCATTAATCCTGTCAGTGTTCCCCGAAGTTGGATCTGGAACCTCAATAGGCGAACGGTATATTTTGGAACCTCAACAACATCAATATTTAAAGGATTATCAACACAAGAAATTCAACAAGCCTTTTGGAGAGGATATATTTGCGTGCGGGGGTTTGAAAGGGAAACGCGAACACCCCGCCCTTTGATGGCTAGACTACACTTCCCAGCTAGCAAATTGGCCAAAACCAACGAGAAGACGAAAAAAGAGTCAGGTCCAGCGAAAGAGAAGCCAGCACCGAAACCAAAACAGAAGCCAGGACCGAAACCAAAACAGAAGGCGGCGAAGAACTCACAAGGAACAAAACCAGATCCTGAAAGTCCGGTGAAGAACTCACAGGAACCGAAACCAAATCCTGAACAGCCTGAACTGATATTAAACAGTGACAGCCTTCAGGAGTAA 6606 0.4231 MEVGENDRKKPEAEIPWIPSTPVKPVVPKSAPICTPKANGAFACLEFSHGGEKNRESHDGIVPAAAITDIGGENEAASANSYATQLGNINGLNDLFVSSVICDNSRDPHGHETSDNACCSKRDYEDDPAKKLDKDGTPPNKELYDPAVEFAAVSSQLKEIYNPDEGNSLCTGLNKTPEKKPRRKKHRPKVIREVKPKRTPKPATPKPAQAKENTTGKRKYVRRKGLNTSTTQTEVTSELAEKTPEATKMSCQRSLNFDIGSKDESSTGRENENPTALLDGVAVQETNLGPVCDLNTSVKHASSGSMSLPEDTQAPDTSSQSTSPGEKSKENPTGKKKRVRRKMNKTSAPSTEMTGELTTEKMCELAKPTSKSSINFDKGGVEESSAVKENATIHLSKENEVTDRTNPDVPLTEDTQATKSSSRMPHEAKPKKSPGVKRQYVRRSGLNKSSTPTEVSGDLPGKVMPESAITSCRMSINSDRGANDESSADRENGTVHSCNKTGAEIQEIDVGLSDDIQTFMNPAVENNYLSFCNNEQTPTVHPCKETAAVMQEVDVGISYDMKTFMNQATESNYMSFCSNGQTSSTSPSQTNPLGDKSKEKLTGNKYERRKRLNKSPICQTKMTGELTGPMMPDSKETPMRRFSDFDMGTEDESSACRQVLNVHIGDTVEETPAGLAYNKDTWMKQALHSYMPLPEGAQTPSTCPSKGNHPGAKPKENSDGDKKCVRKKRSKMTSTPTKRTGGLTEPIMSEPTTISCKMSINFDKGGRDESYMCNESLTSDQNTLVKEILHYCASLSENTQSPSTCLPESNPPGEKQNARNENKRKGLATAEDGNISNSQVSTIKLQMVGCEREHAGTIEHADNSSMNLIGAHYNGLASYQSKFPLQFSNIQKKRRTEKGKTSNSHITSSVITENGAPLIFTPEDAQMHPYASNYNSWMYGFGYNAPVFPIINEYRENYIHNTQTFDEFRLSLRRVTEKSQFPAETSDYNSLTRIRNFIEPNYTANQLDFSDQQAMRDAERPQTCIDVLVEDVPVSSVKKKQNRKRSALSSSAHPNTDQNQMQQCHNVALGNHHLALGKSSGTARGGRRKKVYDVEALVKQFRQLNINAGVGDIVLYKQNALVPFQGSFDPIKKQRPRPKVDLDEETDRVWKLLLLDINHDGVDGTDEEKAKWWEEERKVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVTDHLSSSAFMSLAARFPKKSGSTACDGEGTSQAVNKQQVDIVEPEENTECDVNLLNQSVCNQSSMTKDIIEHSGEKAVSSNDSCRITSSPISLTDESNCKLTESSQSSGPMVMIEEGEEKSCYDGAGKELNDIVSSQSSVISSQISGEFSNDQNPEKIGSCSDSNSEVEDLSSTAKYNSVEDLSSTAKYKNYGSFCKLLEMVSSTKFYEIESQRSKSTENMRDVTHSSLEESIIPSHECNLRLTHNSEAHDPFKAEASSSGILKNKHENEMNTPSFQTAKSAGLVEVTHSQTIASQVHPQEQTNHMQQNFFNSSGQTHDLIQNERYLNLGDHKDVVRSETNEISSTPIKVKTKSQLKEEQEQFDWDSLRIKAQAKAGKREKTENTMDSLDWDAVRCADVGVIADVIKERGMNNRLAERIQKFLNRVVDDHGSIDLEWLRDVPPDQAKEYLLSVRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYPVLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRAECRHFASAFASARLALPGPEQRSMVSVSGNGVTDENPPVVMSQLHLPLPENTNQVVEEIPETEVSGQLAKSEVNICQPIIEEPTTPEPECSQLELSDMEDAFIDDPCEIPTIKLNMEEFTLNLQNYMQQNMELQEGEMSKALVALHPEAASIPGPKLKNVSRLRTEHCVYELPDMHPLLEGWEKREPDDPGKYLLAIWTPGETADSTQAPECKCNSREECGQLCNEMECFSCNSFREANSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHGSSINPVSVPRSWIWNLNRRTVYFGTSTTSIFKGLSTQEIQQAFWRGYICVRGFERETRTPRPLMARLHFPASKLAKTNEKTKKESGPAKEKPAPKPKQKPGPKPKQKAAKNSQGTKPDPESPVKNSQEPKPNPEQPELILNSDSLQE* 2202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 405 423 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 247 262 - -
Mtr1g2076 2201 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 125 316 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr1g2076 2201 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 705 2140 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr1g2076 2201 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 418 608 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr1g2076 2201 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 312 410 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 162 359 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 1036 1059 - -
Mtr1g2076 2201 Pfam Permuted single zf-CXXC unit 1988 2020 IPR028924 -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 578 635 - -
Mtr1g2076 2201 SMART ccc3 1763 1783 IPR003651 GO:0051539
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 692 749 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 2118 2201 - -
Mtr1g2076 2201 SUPERFAMILY DNA-glycosylase 1182 1785 IPR011257 GO:0003824|GO:0006281
Mtr1g2076 2201 Gene3D Hypothetical protein; domain 2 1604 1691 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 106 145 - -
Mtr1g2076 2201 CDD ENDO3c 1610 1728 IPR003265 GO:0006284
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 106 140 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 798 835 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 712 726 - -
Mtr1g2076 2201 Coils Coil 1894 1914 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 395 464 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 798 816 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 225 240 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 178 194 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 735 749 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 578 597 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 2162 2201 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 476 495 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 598 614 - -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 289 328 - -
Mtr1g2076 2201 SMART endo3end 1590 1762 IPR003265 GO:0006284
Mtr1g2076 2201 Pfam RRM in Demeter 2023 2123 IPR028925 -
Mtr1g2076 2201 Gene3D - 1692 1780 IPR023170 -
Mtr1g2076 2201 MobiDBLite consensus disorder prediction 2127 2151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2076 Mtr-Chr1 30685933 30697117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2076 - - mtr:MTR_1g061220 4291.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2076 1 30685933 30697117 Mtr1g2076 1 30685933 30697117 ECH
Mtr7g3195 7 48920351 48930560 Mtr1g2076 1 30685933 30697117 PCT