Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3177 ATGGGGGCTTCGTTGTCGAATCTTGGATCCAACGGTTCAACCATCGCTCCAAGCCTCGGCGACATCCCTGAAAACTGCGTTGCTCGTGTTTTTCTTCATCTTACTCCACCCGAGATTTGCAACTTAGCTCGCTTAAATCGCGCTTTTCGCGGCGCTGCTTCAGCTGATTCCGTTTGGGAATCTAAGCTACCTTCTAACTATCAACATCTTCTAAGGTTAATGCCTGAAGAACAACGCTGTCGGAATCTTTCCAAGAAGGATATTTTCGCTGTTTTCTCTAAACCGTTACCGTTTGATGACGGTAATAAGCAATTGTGGCTCGATAGGGTTACTGGTAGGGTTTGCATGTCAATTTCGGCGAAAGGTTTGTCTATTACTGGAATTGATGATCGGAGATACTGGACTTGGGTTCCTACTGAAGAATCTAGGTTCAACATTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTGACTTTCCATTTCCTGCTGATAATTATACCCTCTCCTTTAGGCTTCACCTCGGACGGTTTTCCAAAAGACTCGGTCGGCGCGTATGCAACTATGACCAGACCCATGGTTGGGATATAAAGCCAGTGATATTTAGGTTGTCAACTTCGGATGGTCAGGAAGCATCATCTGAGTGCTGCTTGGATGAAACTGTGCACGATGATACATACGGCAATCATAAGCGTGGATATTGGGTAGATTACAAGGTAGGTGAGTTTATTGTGACTGGATCAGAACCTACAACAAAAGTTAGATTCTCCATGAAACAGATTGACTGTACACATTCAAAAGGTGGCCTTTGTGTAGATTCTGTATTTATCATACCTAGCGAGTTGAGAGACCGCAAGGGAGGCGGTTTTTTGAAATGA 891 0.4433 MGASLSNLGSNGSTIAPSLGDIPENCVARVFLHLTPPEICNLARLNRAFRGAASADSVWESKLPSNYQHLLRLMPEEQRCRNLSKKDIFAVFSKPLPFDDGNKQLWLDRVTGRVCMSISAKGLSITGIDDRRYWTWVPTEESRFNIVAYLQQIWWFEVDGEVDFPFPADNYTLSFRLHLGRFSKRLGRRVCNYDQTHGWDIKPVIFRLSTSDGQEASSECCLDETVHDDTYGNHKRGYWVDYKVGEFIVTGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSELRDRKGGGFLK* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3177 296 Pfam Phloem protein 2 114 283 IPR025886 -
Mtr7g3177 296 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Mtr7g3177 296 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
Mtr7g3177 296 SUPERFAMILY F-box domain 17 70 IPR036047 GO:0005515
Mtr7g3177 296 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3177 Mtr-Chr7 48763762 48766716 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3177 - - gmx:100807328 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3177 7 48763762 48766716 Mtr7g3177 7 48763762 48766716 ECH
Mtr7g3177 7 48763762 48766716 Mtr1g1578 1 20012845 20023138 PCT