Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1578 ATGGCGGGAACCACCGCCCATTTACTCATCCTCACGCCACATTCATCCTCATTCCCTCGTCCAAACCCTCTATTTCTCCCTTCTTCCCGCCCTCGTCATCTTCCCTCCGCCGTTAAATCCCTCACTCTACGCCATCGCCCCACTCCCTTCAGACCATGTGCTCAATCCAATCAGTTAGATGGTAGTGGTAGTGGAAGCAAAGAGTCAAAAGGATTGAGCTGGGTTGAACCCATTTTGAGCTTTGCTAGGGGCAATGTCTTACCTCTAGCTCTGATTTCTGCGGTGACGTTAGGATTAACATGTCCTAGTCTTGGTTGCGCTGTTGACAAATATCATGTATCCAAAATTGGGCCGTTTGGAATTTTTGTTATCTCAGGGTTGGTGTTGCGAAGCGAAGAAATTGGTGCAGCTGTAGAAGCATGGCCTGTTGGACTCTTTGGGCTAGTATCTATTTTATTTCTTACACCATACTTTTCCAGGGCAATATTACAAATTCAGCTCCAACCCCAAGAATTTATTACAGGGTTAGCCATATTTTGCTGTATGCCAACTACATTATCAAGTGGTGTTGCACTTACCCAGCTTGCTGGAGCAAATACTGCACTGGCTCTTGCAATGACAGTAATATCTAACTTGTTAGGAATATTAATTATTCCATTTTCCATCACAAAATTTGTAGCTAGTGGAGTTGGAGTGACTTTACCCACCAAGCAGTTATTTAAAAGTCTTGTTCTTACCATATTAATCCCCCTTATTTTGGGAAAGGTTCTACGTGAATCTTTTAAAGATGTTGCTGACTTTGTTGACAGAAACCGTAAGCTTTTCTCAGGGATCAGTGCATTTTTCCTTAGCCTGGTACCTTGGATACAAGTGAGCAAGTCAAGGTCGCTTCTGTTAATAGTGAAGCCCAAAGTTTTTCTTGTAGCTATTGGACTGGGAGCACTTCTTCATCTGACCTTATTGGTATTCAATAGCATTGCTGTCCGGAGTCTTTCAATTATCTCTGGTGGTGGAAAATCAACCTTTTCCCGTGAAGAAAATGCCAACGCACTCATACTAGTTGCAAGCCAGAAAACATTACCAGTAATGGTAGCGGTTATAGAGCCACTTTGTGGTGCATTTGGAGAATCTGGGTTACTGGTTCTTCCTTGTATTGCAACACATCTAATCCAGATTATTGTGGACTCTTTTCTTGTCAACTTCATGCGTCGCAAAGACAATCCCGGTAATGTCAAGGTGGCTTAA 1245 0.4297 MAGTTAHLLILTPHSSSFPRPNPLFLPSSRPRHLPSAVKSLTLRHRPTPFRPCAQSNQLDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVDKYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLVSILFLTPYFSRAILQIQLQPQEFITGLAIFCCMPTTLSSGVALTQLAGANTALALAMTVISNLLGILIIPFSITKFVASGVGVTLPTKQLFKSLVLTILIPLILGKVLRESFKDVADFVDRNRKLFSGISAFFLSLVPWIQVSKSRSLLLIVKPKVFLVAIGLGALLHLTLLVFNSIAVRSLSIISGGGKSTFSREENANALILVASQKTLPVMVAVIEPLCGAFGESGLLVLPCIATHLIQIIVDSFLVNFMRRKDNPGNVKVA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1578 414 Pfam SBF-like CPA transporter family (DUF4137) 86 404 IPR016833 -
Mtr1g1578 414 Gene3D - 70 406 IPR038770 -
Mtr1g1578 414 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED 14 408 - -
Mtr1g1578 414 MobiDBLite consensus disorder prediction 47 70 - -
Mtr1g1578 414 MobiDBLite consensus disorder prediction 51 69 - -
Mtr1g1578 414 PANTHER SOLUTE CARRIER FAMILY 10 MEMBER 7 14 408 IPR016833 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1578 K14347 - gmx:100779161 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3177 7 48763762 48766716 Mtr1g1578 1 20012845 20023138 PCT