Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3172 ATGGCTTCAAGGAAAGTGTTCAAGGAAGACAGAGCTGAAGCAGCTGCAAAGCTAGCTGCAAAAGACATTGGCGACGTAAACAGAACAAACGAACGTGAAGAAGGTTACACACTTAATTCTGAATTACAGTTCAAACAAGCACGAGCTGAAGCAGCTTCAAAACTTGCTGCTAAAGATCTTGAAGATGTTAACCGAGCAAGAGAAAGTGCATTCAATGCTTCAGGGTATCAACAAGAAGAACAGAAACCAGGTGTTCTTGGTTCAATGTTCAAAGCAGCAAAAGAAGCTGTAGTTGGAAAGAGTTACGAAGCTGGTGAAAAAGCTAGGGATACTACAGATTATGCAGCTCAGAAAACAAGAGAAAATGCTGATTATGCTGCTGAGAAAGCCAGAGAAACGAAGGACACAACTGCAAATAAAGCCGGGGAATACACAAACTATGCTGCAGAGAAAGCGAGGGAGGCAAAAGATACCACTGCGAATAAAGCAGGGGAGTATACAAACTATGCTGCAGAGAAGGCGAAGGAAGCGAAGGATGCAACGGTGAACAAAGCTGGGGAGTATACGAACTATGCTGCTGATAAGGCGAAGCAGGCAAAGGATGCAACGGTGCAGAAGGCTGGAGAAGCTAAAGATGCTACAGTGAACAAAGCTGGAGAGTATAAGGATTATACTGCTGAGAAGGCTGTAGAAGCTAAGGATACCACCGTGGGGAAGCTTGGAGAGTTGAAGGATTCAGCTGCAGATGCTGCTAAGAGAGCTATGGGTTTCTTGACTGGCAAGAAAGATGAAACTAAGGAGAAGACAAGGGAAATGCTGGGTGGAACGGAAGAAGATGCGAGGATGAGAATGGATGATTTAAGCGTGGAAAGAGGAGGGAGGGGTAGAGAGAAGGTGGTTGTGAAGGTGGATGAGAGTAGGCCAGGAGTGGTGGCTGATGGGCTGAGAGCAGCAGCAGGAATGGACAAGACTGATACGGGATACTTGGAGGAAGAAGGCACCATTCATGTTGAGCGTCGTCGTGAGAAAATGTGA 1035 0.4609 MASRKVFKEDRAEAAAKLAAKDIGDVNRTNEREEGYTLNSELQFKQARAEAASKLAAKDLEDVNRARESAFNASGYQQEEQKPGVLGSMFKAAKEAVVGKSYEAGEKARDTTDYAAQKTRENADYAAEKARETKDTTANKAGEYTNYAAEKAREAKDTTANKAGEYTNYAAEKAKEAKDATVNKAGEYTNYAADKAKQAKDATVQKAGEAKDATVNKAGEYKDYTAEKAVEAKDTTVGKLGELKDSAADAAKRAMGFLTGKKDETKEKTREMLGGTEEDARMRMDDLSVERGGRGREKVVVKVDESRPGVVADGLRAAAGMDKTDTGYLEEEGTIHVERRREKM* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3172 344 PANTHER DAUER UP-REGULATED-RELATED 40 323 - -
Mtr7g3172 344 PANTHER DAUER UP-REGULATED-RELATED 1 34 - -
Mtr7g3172 344 Pfam Late embryogenesis abundant protein 222 271 IPR004238 -
Mtr7g3172 344 Pfam Late embryogenesis abundant protein 145 188 IPR004238 -
Mtr7g3172 344 Pfam Late embryogenesis abundant protein 201 243 IPR004238 -
Mtr7g3172 344 Pfam Late embryogenesis abundant protein 189 229 IPR004238 -
Mtr7g3172 344 Pfam Late embryogenesis abundant protein 167 210 IPR004238 -
Mtr7g3172 344 Pfam Late embryogenesis abundant protein 123 166 IPR004238 -
Mtr7g3172 344 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 40 323 - -
Mtr7g3172 344 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 1 34 - -
Mtr7g3172 344 MobiDBLite consensus disorder prediction 323 344 - -
Mtr7g3172 344 MobiDBLite consensus disorder prediction 258 299 - -
Mtr7g3172 344 MobiDBLite consensus disorder prediction 325 344 - -
Mtr7g3172 344 MobiDBLite consensus disorder prediction 107 138 - -
Mtr7g3172 344 Gene3D - 142 187 - -
Mtr7g3172 344 Gene3D - 188 238 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3172 - - mtr:MTR_7g103280 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3172 7 48716754 48718194 Mtr7g3172 7 48716754 48718194 ECH
Mtr7g3172 7 48716754 48718194 Mtr1g2096 1 30910832 30912324 PCT