Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2096 ATGGCATCAAAACAACCAAGACACGTTGAAGAAATCAGTGTAACAAAAGAACAACATGATCAAGAGAAGCCCGGTGTAATTGGTTCAGTGATGAAGGCTGTTCATGACACCTACGAGAATGCAAGAGAAGCTGTAGTTGGCAAAAGGGACCCAACAACAGAAGTCCATGTTTTCGACAATGACGATCGACTTACACGTGGTGAAGTTAGAGACATATCAGCCAACCAATCACGTGGTGTGTACGATTCTGCAGCTCAGAAGGCGAAGGAAACGAAAGACGCAACAGCTCAGAAGGCGAAGGAAACAAAAGATGCAACGATGCAGAAAACTAATGAGTATGCAGGTTATGCCGGAGAGAAAGCAAGGGAAGCCAAGGACAAAGCTGGGGAGTACAAAGACTATGCTGCGGAAAAGGCAAAGGAAGGAAAAGATGCTACCATGAATAAGATGGGTGAGTATAAGGATTATACGGCTGAGAAGGCGAAAGAAGGGAAAGATGCCACCATGAATAAGATGGGTGAGTATAAGGATTATACAGCTGAGAAGGCGAAGGAAGGGAAGGATAATACAGCGTGGAAGATTGGTGAGATGAAGGACTCTGCTGTTGATGCGGCGAAACGGGCTATGGGTTACTTGGGTGACAAGAAAGAGGAAGCTAAACAGAAAACTGCAGAGACAGCAGAAGCTGCTAAACAGAAAACTGCAGAGACAGCAGAAGCTGCTAAACAGAAAACTGCAGAGACAGCAGAAGCTGCTAAACAAAAGACAGTAGAGGCAAAAGACAAGACCAAGGAAATGTTGAGTGAAGCAGATAAAGAAGCAGGGAGGAAAATGGAAAGTGGAAATTATGGACGTAAAGGATTTGGAGAGGAAACTTGGAGGCGTGGAAATGAGGGGGTGATCAGAACGGAGGATACTCGAACAGGAGCGGTGGCGGAGAGGCTGAAAGCGGCGGATCAGATGACCGGTCAGACATTCAATGATGTGGGACCTTTGGATGATGAAGGGGTTACTCGTGTTGGACTCCTTGATATTAAAAAGAAGTGA 1047 0.4575 MASKQPRHVEEISVTKEQHDQEKPGVIGSVMKAVHDTYENAREAVVGKRDPTTEVHVFDNDDRLTRGEVRDISANQSRGVYDSAAQKAKETKDATAQKAKETKDATMQKTNEYAGYAGEKAREAKDKAGEYKDYAAEKAKEGKDATMNKMGEYKDYTAEKAKEGKDATMNKMGEYKDYTAEKAKEGKDNTAWKIGEMKDSAVDAAKRAMGYLGDKKEEAKQKTAETAEAAKQKTAETAEAAKQKTAETAEAAKQKTVEAKDKTKEMLSEADKEAGRKMESGNYGRKGFGEETWRRGNEGVIRTEDTRTGAVAERLKAADQMTGQTFNDVGPLDDEGVTRVGLLDIKKK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2096 348 MobiDBLite consensus disorder prediction 246 307 - -
Mtr1g2096 348 Coils Coil 85 105 - -
Mtr1g2096 348 MobiDBLite consensus disorder prediction 214 307 - -
Mtr1g2096 348 MobiDBLite consensus disorder prediction 68 128 - -
Mtr1g2096 348 MobiDBLite consensus disorder prediction 9 23 - -
Mtr1g2096 348 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 258 340 - -
Mtr1g2096 348 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 126 255 - -
Mtr1g2096 348 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 6 127 - -
Mtr1g2096 348 Pfam Late embryogenesis abundant protein 92 130 IPR004238 -
Mtr1g2096 348 Pfam Late embryogenesis abundant protein 154 197 IPR004238 -
Mtr1g2096 348 Pfam Late embryogenesis abundant protein 124 153 IPR004238 -
Mtr1g2096 348 PANTHER DAUER UP-REGULATED-RELATED 258 340 - -
Mtr1g2096 348 PANTHER DAUER UP-REGULATED-RELATED 6 127 - -
Mtr1g2096 348 PANTHER DAUER UP-REGULATED-RELATED 126 255 - -
Mtr1g2096 348 Gene3D - 79 130 - -
Mtr1g2096 348 Gene3D - 131 181 - -
Mtr1g2096 348 MobiDBLite consensus disorder prediction 85 107 - -
Mtr1g2096 348 MobiDBLite consensus disorder prediction 1 26 - -
Mtr1g2096 348 MobiDBLite consensus disorder prediction 214 229 - -
Mtr1g2096 348 Coils Coil 216 255 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2096 - - cam:101494467 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2096 1 30910832 30912324 Mtr1g2096 1 30910832 30912324 ECH
Mtr7g3172 7 48716754 48718194 Mtr1g2096 1 30910832 30912324 PCT