Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3154 ATGTCTCCTGCAATGGCAATGAATGATGAAAGGAGTGAGGATTGTCATGCAATAGAAAGTGAATATCATAAAGGAGTGAAGCATTTGTATGAGAAAGGTTATCTTCACAAGGTACCAAAGAAGTATATGTTTCCAGCTTCAGAAAGACCCACAAAGAGTATGGATGATGATTCAAATGTTGCTAAAGAAAATCTTCAGCTACCCATAATTGATTTCACTGATCTTATTGGTCCAAATAGGCTACAAGCTCTTGAGTCTCTAGCCAATGCTTGTGAACAATATGGATTTTTCCAGCTAGTAAATCACAACATATCAGATGATATAACGAGGAGCAGCATAGATGTTGCAGGAAGGTTCTTCGATCTTCCATTGGAGGAGAGAGCTAAGTATATGACAACTGATATGAGAGCAGCTGTTAGATATGGGACCAGTTTCAGTCAAACAAAAGACTCCGTGTTCTGTTGGAGAGATTTCTTGAAACTCATTTGTAATCCTTTGCCTGATTTCGTCCCTCATTGGCCTGCCTCTCCATTGGACTTTCAGGAAGTGGTGGCCAGCTATGCAGAAAAAACCAAACATTTGTTCTTGACAATAATGGAAGCCATCCTAGAAAGTTTAGGAATTATGGAAGAGGAGGCCAAAGAAAATGACAACAATAATAATAATAATAATATTATGAAAGAATTGGACAATGGGAGCCAGATGTTGGTAACCAATTTTTACCCACCATGCCCTGAACCAGACCTAACACTTGGAATGCACCCTCACTCTGATTATGGCTTCCTCACACTTCTCCTCCAAGATGAAGTGGAGGGTTTGCAAATCCAATATCAAGACAAATGGCTCACTGTTCAACCTATTCCCAATGCTTTCGTTGTCAATATTGGTGATCATTTAGAGATATTTAGCAACGGAAAATACAAGAGTGTATTACATAGGGTTCTGGTGAATAAAGCTAAGAGCAGAGTATCAGTGGCTTCTCTGCATAGCCTTCCTTTTGACTGCACTGTGAGACCGTCACCAAAACTCATTGATGAAGAGAATCCAAAGCGTTACATGGACACAGATTTTGCTAGCTTTCTTGCGTATGTGTCTACAAGAGAAACCAAGAAAAAGGATTTCCTAGAGTCCAGAAAATTACCATACACATAA 1152 0.3941 MSPAMAMNDERSEDCHAIESEYHKGVKHLYEKGYLHKVPKKYMFPASERPTKSMDDDSNVAKENLQLPIIDFTDLIGPNRLQALESLANACEQYGFFQLVNHNISDDITRSSIDVAGRFFDLPLEERAKYMTTDMRAAVRYGTSFSQTKDSVFCWRDFLKLICNPLPDFVPHWPASPLDFQEVVASYAEKTKHLFLTIMEAILESLGIMEEEAKENDNNNNNNNIMKELDNGSQMLVTNFYPPCPEPDLTLGMHPHSDYGFLTLLLQDEVEGLQIQYQDKWLTVQPIPNAFVVNIGDHLEIFSNGKYKSVLHRVLVNKAKSRVSVASLHSLPFDCTVRPSPKLIDEENPKRYMDTDFASFLAYVSTRETKKKDFLESRKLPYT* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3154 383 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 231 331 IPR005123 -
Mtr7g3154 383 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 380 - -
Mtr7g3154 383 SUPERFAMILY Clavaminate synthase-like 24 367 - -
Mtr7g3154 383 Pfam non-haem dioxygenase in morphine synthesis N-terminal 67 165 IPR026992 -
Mtr7g3154 383 Gene3D - 16 363 IPR027443 -
Mtr7g3154 383 PRINTS Isopenicillin N synthase signature 87 104 - -
Mtr7g3154 383 PRINTS Isopenicillin N synthase signature 256 277 - -
Mtr7g3154 383 PRINTS Isopenicillin N synthase signature 291 317 - -
Mtr7g3154 383 Pfam 2OG-Fe(II) oxygenase superfamily 234 329 IPR044861 -
Mtr7g3154 383 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 16 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3154 Mtr-Chr7 48548869 48552902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3154 24 360 Glycosyltransferase AT5G59530 32.286 1.44e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3154 - - gmx:100778488 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3154 7 48548869 48552902 Mtr7g3154 7 48548869 48552902 ECH
Mtr7g3154 7 48548869 48552902 Mtr1g2109 1 31064282 31068354 PCT