Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2109 ATGTCACCTGGAATGACAATATTTAGTGAAGATATCAAAAGGGACGATGATGATATAGAAAATCAATTTCTGAAAGGAGTGAAGCAGCTAGTTGATAATGGACTTCACATGGTACCTAAAAAGTACATACTTCCTCCTTCTGAACGTCCTGCTAAGAATACCGAAGATTCAAATTTTGGCAAACAAAACCTACAGTTACCAATCATAGATTTCTCTGATTTGATTGGTCCAAATAGGCCCCAAGTTCTTCAATCATTGGCTAATGCTTGTGAACGTTATGGATTTTTCCAGGTGGTAAACCATGGAATCTCAGAAGATGTTATCAACAACATGATGGATGTGTGTGGAAATTTTTTTGATCTTCCATTTGAGGAAAGAGGCAAGTACATGACATCTGATATGAGAGCAGCAGTTCGATATGGAACAAGCTTTAGTCAAACAAAAGACAAAGTGTTCTGTTGGAGAGATTTCTTGAAACTCATATGCCATCCTCTGCCTGATTATCTTCCCCATTGGCCTGATTCACCCGTGGACTTAAGGAAAGTGGCGGCTACCTACGCAGAAGAAACCAAACACTTATTTCTAAGGTTAATGGAAGCCATAGTAGAGAGTTTAGGTATAGTTGAATCCAACAAAGAAGAAAAGGACAATCTTATCAAAGAATTGGAAGATGGAAGCCAGCTTATGGCGGCAAATTTTTATCCACCATGTCCTCAACCTGACCTAACCCTAGGCATGCCCCCTCATTCTGACTATGGATTCCTCACACTCCTTCTTCAAGATGAGGTAGAGGGTTTGCAAGTCCAATTCCAAGAACAATGGTTCACGGTTCAACCTATTAATAATACATTCGTTGTTAATGTTGGTGATCACCTTGAGATTTATAGCAACGGGAAATACAAGAGTGTGCTACATAGGGTTCTGGTGAATTCAAGTAAGCGTAGAAGATCCATTGCTTCATTGCATAGCATTTCGTTCAACAGTACAGTGAGACCTTCACCTACACTCATTGACAAAGCCAATCCCAAACGTTATGCAGACACCGATTTTGAAACTTTTCTTGCCTACATTTCAACCAACGAGACCAAGAGAAAGAGTTTTCTGGAGTCTAGGAAATTGACTTCTATCTTACTTGACTAA 1140 0.3956 MSPGMTIFSEDIKRDDDDIENQFLKGVKQLVDNGLHMVPKKYILPPSERPAKNTEDSNFGKQNLQLPIIDFSDLIGPNRPQVLQSLANACERYGFFQVVNHGISEDVINNMMDVCGNFFDLPFEERGKYMTSDMRAAVRYGTSFSQTKDKVFCWRDFLKLICHPLPDYLPHWPDSPVDLRKVAATYAEETKHLFLRLMEAIVESLGIVESNKEEKDNLIKELEDGSQLMAANFYPPCPQPDLTLGMPPHSDYGFLTLLLQDEVEGLQVQFQEQWFTVQPINNTFVVNVGDHLEIYSNGKYKSVLHRVLVNSSKRRRSIASLHSISFNSTVRPSPTLIDKANPKRYADTDFETFLAYISTNETKRKSFLESRKLTSILLD* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2109 379 Pfam 2OG-Fe(II) oxygenase superfamily 227 322 IPR044861 -
Mtr1g2109 379 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 224 324 IPR005123 -
Mtr1g2109 379 Pfam non-haem dioxygenase in morphine synthesis N-terminal 66 167 IPR026992 -
Mtr1g2109 379 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 24 373 - -
Mtr1g2109 379 SUPERFAMILY Clavaminate synthase-like 25 359 - -
Mtr1g2109 379 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 24 373 - -
Mtr1g2109 379 PRINTS Isopenicillin N synthase signature 86 103 - -
Mtr1g2109 379 PRINTS Isopenicillin N synthase signature 249 270 - -
Mtr1g2109 379 PRINTS Isopenicillin N synthase signature 284 310 - -
Mtr1g2109 379 Gene3D - 17 356 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2109 Mtr-Chr1 31064282 31068354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2109 25 353 Glycosyltransferase AT5G59530 34.808 6.15e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2109 - - gmx:100805175 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3154 7 48548869 48552902 Mtr1g2109 1 31064282 31068354 PCT