Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3023 ATGGTATACTACCACCCCCCTCATTTTGGTTACCCTCTTCTTCATTTTCTTCAACACACTCACTCAATCTCACTCACCATGAATTCCATACCCAACCTCCGTCACTCCAACCTCTCACTCAATCACAACCGTCCATCTTTTCCCTTATCACCCTCCCTCTCCTTCCGTTCCCATCCACCACCACAATTCCTCCCTCCATCCTCCTTTAAGCTTCCACCAATCAAATCCTCATCTTCCCAAAACGACCCTGCCTTCCAAAAACCCCAAAATAACCCTACTCCACCAAACCCTTTCCAAACCCTAACCTCTCTCTTCTCCCCCGTTGTTGAAACCACATGCATCGTTATCGCCGCTACCGCTTTCTTCTTCATGCGCTTCCATCACACTCCCGTCATCGCCGCAACTCTCTCCCCTCCGACCACTGTAACGGAAAATGCTACGATGGAGGAAGATGCTGAAAAGGTAATTCAAGAGAAATTGACTGAAAATCCAAATGATGCTGAAGCTCTACGTGCTCTAATGGAGGTGAAAATCAAAGCAAGGGAAATTGATGAAGCTATTGGTGTTATAGACCGTTTGATTGAAATTGAACCTGAAGAAATGGAGTGGCGGTTGTTGAAGGCGAATATGTATATCTACAACGACGACCATGAATCTGCTAAGAAATTGTTTGAAGAGATTTTGAAGAAAGATCCACTTCGAGTTGAAGCTTTTCATGGACTTGTAATGGCGAGTTCTGAATCGAATGAACAATCGGATGAACCTTTGAAAGGATTGTTGAAGAGAGTTGAAAAAGCAATGGAGTTGTGCAAGAAACAGAAGAAGGTTTCGGATGTTAGGGATTTTAGGTTATTGGTTGCTCAGATTAAGGTGATGGAAGGGAATTTTTCAGAGGCGCTTAAAGCTTATCAGGATTTGGTGAAAGAAGAACCTAGAGATTTTAGGCCTTATCTGTGTCAGGGTATTATATATACATTGCTTAGAAAGAAAGATGAAGCCGAGAAGCAATTCGATCAGTTCCGAAAGCTTGTCCCGAAGAATCATCCTTATAAAGAGTATTTTGATGATAACATGAATGGTACAAATTTTTTCCCGCAGAAATTCGAGAGGGAAGAAGCTGGTGCTAGGAGTTGA 1134 0.4286 MVYYHPPHFGYPLLHFLQHTHSISLTMNSIPNLRHSNLSLNHNRPSFPLSPSLSFRSHPPPQFLPPSSFKLPPIKSSSSQNDPAFQKPQNNPTPPNPFQTLTSLFSPVVETTCIVIAATAFFFMRFHHTPVIAATLSPPTTVTENATMEEDAEKVIQEKLTENPNDAEALRALMEVKIKAREIDEAIGVIDRLIEIEPEEMEWRLLKANMYIYNDDHESAKKLFEEILKKDPLRVEAFHGLVMASSESNEQSDEPLKGLLKRVEKAMELCKKQKKVSDVRDFRLLVAQIKVMEGNFSEALKAYQDLVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFDQFRKLVPKNHPYKEYFDDNMNGTNFFPQKFEREEAGARS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3023 377 MobiDBLite consensus disorder prediction 66 98 - -
Mtr7g3023 377 SMART tpr_5 280 313 IPR019734 GO:0005515
Mtr7g3023 377 SMART tpr_5 201 234 IPR019734 GO:0005515
Mtr7g3023 377 SMART tpr_5 167 200 IPR019734 GO:0005515
Mtr7g3023 377 SMART tpr_5 314 347 IPR019734 GO:0005515
Mtr7g3023 377 SUPERFAMILY TPR-like 151 342 IPR011990 GO:0005515
Mtr7g3023 377 Pfam Tetratricopeptide repeat 293 345 - -
Mtr7g3023 377 Gene3D Tetratricopeptide repeat domain 279 357 IPR011990 GO:0005515
Mtr7g3023 377 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 27 357 - -
Mtr7g3023 377 MobiDBLite consensus disorder prediction 71 87 - -
Mtr7g3023 377 ProSiteProfiles TPR repeat profile. 167 200 IPR019734 GO:0005515
Mtr7g3023 377 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 27 357 - -
Mtr7g3023 377 Gene3D Tetratricopeptide repeat domain 145 278 IPR011990 GO:0005515
Mtr7g3023 377 Pfam Tetratricopeptide repeat 151 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3023 Mtr-Chr7 47112124 47113539 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3023 - - gmx:102661172 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3023 7 47112124 47113539 Mtr1g2272 1 33118596 33119663 PCT