Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2272 ATGAATTCTCTACCAAAAACCCATCTCTATCACCACCTCTCTCTCACTCACCGCCACTCTTCATTCCCTAAACTCTCCTCCCCCTCTCTACCTTATCACTCATTTTCTTCTTCACCCCCCTTATTACTACCCTCCATCAAAGCATCATCCTCTCCAAATAACAACAACAACCCTTTTCAAAAACCCCAAAACACTTTCTCCCAAATTCTCAAAACCCTTAACCCCTTTACCTCACCTCTCTTTGAACCTGCTTACGTCGCAGTAGCACTTCTCGCTCTCTTCTTATTCCGTTTTCAACAAAACCCCGCCACCGCCAGGTCACCACTCCCATCACCACCACCAGCACAATCCTCCACTGCTACCACGACCACCACCACCGCAACGGAAAATCGACCCAATAAAGAAAACAACACTACAATTGATGACAAATTGATTGAAAATTCCAACGATGCAAATGCACTTCGGTCTTTGATTGAGGAAAACGTGAAAGCACGCAAACTAAGCGAAGCTATTCGCGCTGTGGAACGATTAATGGAACTTGAACCGGAGGAATTTGATTTGTTGCTACTAAAATCACATTTGCATAGTCATAACGGTGAACATGAATTAGCTAAGAAAGGATTTGAATTTACTCTGCAGCAAGATCCGTTTAATTCGGAAGCTTATCGCGGTCTTTTGATGGCGAATTCGGAGTTAAAGGAGCCAATGGAGGGATTTTTGAATAGGGTTGATGAGGTAGTGAAGTTTTTTGAGGAGAAAAAAATGGAGTCAGAAGCTAGAGAATTTAAGCTTTTGATTGCGCAGGTGAAGGTGATGGAAGAGGATTATTCGGGTGCATTGAAGGTGTATGAGGAAATTGTGAAGGAAGAACCGAGTGATTTTAGACCTTATTTGTGTCAGAGTGTTGTGTATAGTTTGCTTCGGAAGAATGATGAAGCTCAGAAACAGTTTGAGGAGTTTAGAAGAATTGTTCCGGAGAATCATCCTTATAAAAAGTATTTTGAGGATAACACCAAGGTTTTGTCAAAGAAGCTAGAAATGGGAGGAATAGAAGAAGCAAAGATTTGA 1068 0.4185 MNSLPKTHLYHHLSLTHRHSSFPKLSSPSLPYHSFSSSPPLLLPSIKASSSPNNNNNPFQKPQNTFSQILKTLNPFTSPLFEPAYVAVALLALFLFRFQQNPATARSPLPSPPPAQSSTATTTTTTATENRPNKENNTTIDDKLIENSNDANALRSLIEENVKARKLSEAIRAVERLMELEPEEFDLLLLKSHLHSHNGEHELAKKGFEFTLQQDPFNSEAYRGLLMANSELKEPMEGFLNRVDEVVKFFEEKKMESEAREFKLLIAQVKVMEEDYSGALKVYEEIVKEEPSDFRPYLCQSVVYSLLRKNDEAQKQFEEFRRIVPENHPYKKYFEDNTKVLSKKLEMGGIEEAKI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2272 355 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 348 - -
Mtr1g2272 355 MobiDBLite consensus disorder prediction 104 140 - -
Mtr1g2272 355 SUPERFAMILY TPR-like 163 318 IPR011990 GO:0005515
Mtr1g2272 355 MobiDBLite consensus disorder prediction 116 134 - -
Mtr1g2272 355 Gene3D Tetratricopeptide repeat domain 94 341 IPR011990 GO:0005515
Mtr1g2272 355 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2272 Mtr-Chr1 33118596 33119663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2272 - - cam:101497721 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3023 7 47112124 47113539 Mtr1g2272 1 33118596 33119663 PCT