Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2994 ATGGGTCAAGGAACACCAGGCGGCGGTTTGAACCGGCAACCGGGTGACCGGAAACCAGATGGCAACGACAAAAAGGACAAGAAATTCGAACCGGCCGCACCACCAGCTCGCGTCGGTCGCAAACAGCGAAAACAAAAGGGTTCTGAGGCTGCGTCGCGGTTGCCGACTGTAACTCCGTTATCGAAGTGCAAACTTCGGTTATTGAAACTGGAACGAATCAAAGACTATTTGTTGATGGAGGAAGAGTTTGTAGCGAATCAGGAACGGTTGAAGCCTCAGGAAGAGAAAGCTGAAGAAGATAGATCTAAGGTTGATGATCTTCGTGGTTCGCCTATGAGCGTTGGAAATCTCGAAGAGCTTATTGATGAGAATCATGCTATTGTTTCGAGTTCTGTTGGACCGGAGTATTATGTTGGGATTTTGTCGTTTGTTGATAAGGATCAATTGGAACCTGGTTGCGCTATCTTGATGCATAACAAGGTTCTTTCTGTTGTTGGACTTCTTCAAGATGAAGTTGATCCAATGGTCTCTGTAATGAAGGTTGAGAAGGCTCCTTTGGAATCATATGCTGACATTGGTGGTTTAGATGCCCAGATACAGGAAATTAAAGAAGCCGTAGAGCTTCCCCTGACACATCCTGAACTGTATGAAGATATTGGTATCAAGCCTCCAAAGGGAGTCATTTTATATGGAGAACCTGGTACAGGAAAGACACTTCTTGCAAAGGCTGTGGCCAACTCAACATCAGCAACATTCTTGCGTGTTGTTGGTAGTGAATTGATTCAAAAATACTTAGGAGATGGTCCAAAACTTGTGAGGGAACTTTTTCGAGTTGCTGATGATCTTTCTCCCTCTATTGTCTTTATTGATGAAATAGACGCTGTTGGTACAAAGAGGTATGATGCTCACTCAGGTGGAGAGCGTGAAATTCAAAGGACCATGTTGGAGTTGCTGAACCAGTTAGATGGTTTTGATTCTAGAGGAGATGTTAAAGTTATTCTCGCAACCAACAGAATTGAAAGCCTCGATCCAGCTCTGCTAAGACCAGGTCGAATAGACAGGAAGATTGAATTTCCTCTCCCTGATATCAAAACTAGGAGACGCATTTTCACGATCCATACATCTAGGATGACATTAGCTGATGATGTCAATTTAGAAGAATTTGTCATGACTAAGGATGAGTTCTCTGGAGCTGATATAAAAGCAATATGTACCGAAGCTGGCTTACTTGCTTTACGAGAACGCCGAATGAAGGTGACCCATGCTGATTTTAAAAAGGCAAAAGATAAAGTTATGTTTAAGAAGAAAGAAGGGGTGCCCGAAGGATTGTATATGTGA 1338 0.432 MGQGTPGGGLNRQPGDRKPDGNDKKDKKFEPAAPPARVGRKQRKQKGSEAASRLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFTIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKDKVMFKKKEGVPEGLYM* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2994 445 Gene3D - 180 360 IPR027417 -
Mtr7g2994 445 Gene3D - 365 439 - -
Mtr7g2994 445 Gene3D - 112 179 IPR012340 -
Mtr7g2994 445 Pfam AAA+ lid domain 382 426 IPR041569 -
Mtr7g2994 445 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 18 445 - -
Mtr7g2994 445 Pfam Proteasomal ATPase OB C-terminal domain 114 167 IPR032501 -
Mtr7g2994 445 MobiDBLite consensus disorder prediction 1 55 - -
Mtr7g2994 445 MobiDBLite consensus disorder prediction 89 109 - -
Mtr7g2994 445 SMART AAA_5 223 362 IPR003593 -
Mtr7g2994 445 MobiDBLite consensus disorder prediction 89 107 - -
Mtr7g2994 445 Pfam ATPase family associated with various cellular activities (AAA) 227 360 IPR003959 GO:0005524|GO:0016887
Mtr7g2994 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 438 IPR027417 -
Mtr7g2994 445 ProSitePatterns AAA-protein family signature. 330 348 IPR003960 GO:0005524|GO:0016887
Mtr7g2994 445 MobiDBLite consensus disorder prediction 16 34 - -
Mtr7g2994 445 PANTHER BNAA08G13550D PROTEIN 18 445 - -
Mtr7g2994 445 CDD AAA 193 360 - -
Mtr7g2994 445 TIGRFAM 26Sp45: 26S proteasome subunit P45 family 80 432 IPR005937 GO:0005737|GO:0030163|GO:0036402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2994 Mtr-Chr7 46804772 46810120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2994 188 430 Miscellaneous Gene Families AT3G47060 44.355 9.28e-55 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2994 K03062 - gmx:100798835 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2994 7 46804772 46810120 Mtr7g2994 7 46804772 46810120 ECH
Mtr7g2994 7 46804772 46810120 Mtr1g2309 1 33585259 33589986 PCT