Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2953 ATGAGACGTCGCCCTGTGGCGGCCATTTTCTCCGATCAAATGGAGAAATCAACTACCAAATCCCACAATTCCCGTATCTTCTTCCTCGCTTCTCTCTCCGCTTTTTTCTGGCTTTTACTCCTCTACTTCCATTTCATCATCCTCCCCCACCAACAATCCTCCACCACCGTCAACATCCAACAACCACCACCACGGAAGCATTTCGGCTTCCCTGATATCAAAAAAACTGATCCATGTGGAGGTAGATACATCTACGTCCACAATCTTCCATCAAGGTTCAACCAAGACATGTTAAGAGAATGCAAAACCCTAAGTCTTTGGACGAACATGTGTAAGTTTACTACCAATGCAGGTCTTGGTCCGCCACTCGAAAACATCGACGGAGTTTTCTCTGATACTGGTTGGTATGCTACTAATCAATTTGCTGTTGATGTTATTTTCGCGAACCGGATGAAACAATATGAATGTTTGACAAATGATTCTTCAATTGCTGCTGCTGTTTTTGTACCGTTTTATGCTGGATTTGACATTGCACGTTATCTTTGGGGGTATAATATTTCAATGAGAGATGCTGCTTCTGTTGAGCTTGTTGATTGGTTGATGAAGAGACCGGAATGGGGTGTTATGAATGGGAGAGATCATTTTCTTGTTGCTGGTAGGATTACTTGGGATTTTAGGAGATTGAGTGAGGATGAAAAAGATTGGGGTAATAAGCTTTTGTTTTTACCTGCTGCTAAGAATATGTCTATGCTTGTTGTTGAATCTAGTCCTTGGAATGCTAATGATTTTGGGATTCCTTATCCGACGTATTTCCATCCCGCGAAAGATAAGGATGTTTTTGTTTGGCAGGAGAGGATGAGAAGGTTGGAGAGGAAATGGCTTTTCTCTTTTGCGGGTGCACCTCGTCCTGGTAATGCAAAATCGATTAGGGGTCAGATAATTGAGCAATGTAGGAGTTCTAAAGTTGGTAAGCTTTTGGAGTGTGATTTTGGGGAAAGTAAATGTCATTCTCCTAGTAGCATAATGCAGATGTTTCAGGGGTCCGTTTTTTGTCTTCAACCTCAGGGTGATTCTTATACAAGAAGATCTGCTTTTGATTCGATGTTGGCTGGTTGTATACTCGTGTTTTTCCATCCGGGTTCGGCGTATACACAATATACTTGGCATCTTCCTAAGGATTATACAAAGTATTCTGTGTTCATTCCGGAGGATGATATTCGAAAGAGGAATGTTAGTATAGAGGAGAGGCTTAGTCAGATACCTGAGGAACGAGTGAGGATCATGAGAGAGGAGGTGATTAGTCTCATTCCTAGATTAGTTTACGCTGATCCTCGCTCTAAGTTAGAGACTTTGAAAGATGCTTTTGATGTTTCTGTACAAGCTGTGATTGATAAGGTTACCAATTTGAGAAAGGATATTATTGAAGGGCGCACGGACGAAAACTTCATCGAGGAGAATAGTTGGAAATATGCATTGTTGGATGAGGGACAGCATGAGGTAGGACCTCATGAATGGGATCCTTTCTTTTCTAAACCCAAGGATGGAAATGGAGAATCCAGTGATTCCTCTGCTGAAGTTGCGAAAAATTCTTGGAAAAATGAGCAAAGAACTCAATCGTGA 1620 0.4167 MRRRPVAAIFSDQMEKSTTKSHNSRIFFLASLSAFFWLLLLYFHFIILPHQQSSTTVNIQQPPPRKHFGFPDIKKTDPCGGRYIYVHNLPSRFNQDMLRECKTLSLWTNMCKFTTNAGLGPPLENIDGVFSDTGWYATNQFAVDVIFANRMKQYECLTNDSSIAAAVFVPFYAGFDIARYLWGYNISMRDAASVELVDWLMKRPEWGVMNGRDHFLVAGRITWDFRRLSEDEKDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDKDVFVWQERMRRLERKWLFSFAGAPRPGNAKSIRGQIIEQCRSSKVGKLLECDFGESKCHSPSSIMQMFQGSVFCLQPQGDSYTRRSAFDSMLAGCILVFFHPGSAYTQYTWHLPKDYTKYSVFIPEDDIRKRNVSIEERLSQIPEERVRIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAVIDKVTNLRKDIIEGRTDENFIEENSWKYALLDEGQHEVGPHEWDPFFSKPKDGNGESSDSSAEVAKNSWKNEQRTQS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2953 539 MobiDBLite consensus disorder prediction 501 539 - -
Mtr7g2953 539 Pfam Exostosin family 79 416 IPR040911 -
Mtr7g2953 539 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 73 493 IPR004263 GO:0006486|GO:0016757
Mtr7g2953 539 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 59 IPR004263 GO:0006486|GO:0016757
Mtr7g2953 539 MobiDBLite consensus disorder prediction 515 539 - -
Mtr7g2953 539 PANTHER BNAA09G10260D PROTEIN 73 493 - -
Mtr7g2953 539 PANTHER BNAA09G10260D PROTEIN 16 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2953 Mtr-Chr7 46325362 46327687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2953 K20888 - gmx:100811811 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2953 7 46325362 46327687 Mtr7g2953 7 46325362 46327687 ECH
Mtr7g2953 7 46325362 46327687 Mtr1g2345 1 34010045 34012734 PCT