Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2345 ATGCAAATGAGACGGCGCCCTGTGGCGGGCGTTCTCCCTGATCAAATGGAAAAAGGGGGATCAAAGAATCAAACTTCACGCCTTTGTTGTTTAGCTTCTTTATCCGCTTTTCTATGGATTTTTCTATTATACTTTCATTTTGTCTTCCTTAGAGCTGATAATACTACTACTACAAATACCACTCAATTTGTTGATGATCACATTACCAAATCAACACCTGTTTCTGTTAATTTTGATGAATCTACATCAAACCATGATGTTATTGATAAACCTCGAGTGAAATCATCGCAACCGCCTCCCAGAAAAATTGGGTTTCCGGAGCCGGTTGCAATAAAGAGTGACACCCCTGACCCTGAGAAGGAGGAGAAGAAGGAGGAGAAGAAAGAGGAGGAGAAGAAGGAGGAGAAGAGTTTTCCTTTTATGAAAGCGTTGAAAACCGGTGAAAATAAGAGTGATCCTTGTGGGGGGAGGTATATTTATGTGCATGATCTTCCTTCAAGGTTTAATGAGGATATGTTGAAGGAGTGTAAGAGTTTGAGTCTTTGGACTAATATGTGTAAGTTTACTACCAATGCTGGTCTTGGGCCGCCACTTGAGAATGTTGAAGGGGTTTTCTCCGATACGGGTTGGTATGCGACAAATCAGTTTGCTGTTGATGTTATATTTAGTAATAGGATGAAGCAGTATGAGTGTTTGACTGAGGATTCTTCAATTGCTGCTGCGATTTTTGTTCCGTTTTATGCTGGGTTTGATATTGCGCGTTATCTTTGGGGTTATAATATCTCGAGGAGGGATGCGGCTTCACTTGATCTGGTTGATTGGCTTATGAAGAGGCCGGAGTGGAGTATCATGAATGGGAAGGATCATTTTCTTGTTGCGGGAAGGATAACATGGGATTTTCGGAGATTGTCTGAGGAAGAAACGGATTGGGGGAATAAGCTTCTGTTTTTACCGGCAGCGAAGAATATGTCCATGCTTGTGGTAGAGTCGAGTCCATGGAATGCAAATGATTTTGGGATTCCTTATCCTACATACTTCCACCCTGCAAAAGATGCTGATGTGTTCAATTGGCAGGACAGAATGAGGCATTTAGAGAGGAAGTGGCTTTTCTCATTTGCTGGAGCTCCCCGTCCTGACAATGCCAAATCAATCAGGGGTCAGTTAATTGAGCAATGCAGAAGTTCACCGGTTGGTAAGCTTTTGGAATGCGACTTCGGTGAAAGCAAATGTCATTCTCCCAGTAGCATAATGCAGATGTTTCAAAGCTCACAGTTCTGCTTGCAACCTCAGGGTGATTCATACACTCGAAGGTCTGCCTTTGATTCAATGTTGGCTGGCTGTATACCTGTCTTCTTCCATCCAGGTTCGGCATACACACAGTATACTTGGCATCTTCCTAAGAATTATACCAAGTATTCTGTCTTCATTCCAGAGGACGATATTCGTAAGAGGAATATGAGTATAGAGGAAATACTTGGTCAGATACCTCCTGAACAAGTGAGGATCATGAGAGAAGAGGTCATTGGTCTCATTCCAAGACTAGTATATGCTGACCCTCGCTCCAAGTTAGAAACTCTTAAAGACGCATTTGATGTTGCTGTACAAGCAGTAATTGACAAAGTTACACATTTGAGGAAGGATATTATTGAAGATCGTATCGATAAAAACTTCATTGAGGAGAACAGTTGGAAATATGCTTTGTTGGATGAGGGAAAGCATGAGGTTGGTCCTCATGAATGGGATCCTTTCTTCTCAAAACCAAAAAATGATGGTAGTGGAGAGTCCACTGATTCATCTGCTGAAGCTGCAAAAAATTCTTGGAAGAATGAGCAAAGAAATCCATTGTAA 1848 0.4183 MQMRRRPVAGVLPDQMEKGGSKNQTSRLCCLASLSAFLWIFLLYFHFVFLRADNTTTTNTTQFVDDHITKSTPVSVNFDESTSNHDVIDKPRVKSSQPPPRKIGFPEPVAIKSDTPDPEKEEKKEEKKEEEKKEEKSFPFMKALKTGENKSDPCGGRYIYVHDLPSRFNEDMLKECKSLSLWTNMCKFTTNAGLGPPLENVEGVFSDTGWYATNQFAVDVIFSNRMKQYECLTEDSSIAAAIFVPFYAGFDIARYLWGYNISRRDAASLDLVDWLMKRPEWSIMNGKDHFLVAGRITWDFRRLSEEETDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADVFNWQDRMRHLERKWLFSFAGAPRPDNAKSIRGQLIEQCRSSPVGKLLECDFGESKCHSPSSIMQMFQSSQFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNMSIEEILGQIPPEQVRIMREEVIGLIPRLVYADPRSKLETLKDAFDVAVQAVIDKVTHLRKDIIEDRIDKNFIEENSWKYALLDEGKHEVGPHEWDPFFSKPKNDGSGESTDSSAEAAKNSWKNEQRNPL* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2345 615 MobiDBLite consensus disorder prediction 589 615 - -
Mtr1g2345 615 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 17 568 IPR004263 GO:0006486|GO:0016757
Mtr1g2345 615 MobiDBLite consensus disorder prediction 74 137 - -
Mtr1g2345 615 MobiDBLite consensus disorder prediction 113 137 - -
Mtr1g2345 615 Pfam Exostosin family 154 490 IPR040911 -
Mtr1g2345 615 MobiDBLite consensus disorder prediction 578 615 - -
Mtr1g2345 615 MobiDBLite consensus disorder prediction 1 23 - -
Mtr1g2345 615 PANTHER BNAA09G10260D PROTEIN 17 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2345 Mtr-Chr1 34010045 34012734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2345 K20888 - gmx:100780467 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2345 1 34010045 34012734 Mtr1g2345 1 34010045 34012734 ECH
Mtr7g2953 7 46325362 46327687 Mtr1g2345 1 34010045 34012734 PCT