Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2861 ATGGCAACCATTATTGCTGGCACCTCAACATCTTCAATCATCCGCACAAGTTTTGTGCACAAGCAACCTCTTGGAGTCTCATCCCATACCGTTGTTGCTAAGGTTGGAAGAGTGAGATGTTCCATTGAGGGAAAGCCTGATGTGCAAGGAAGCAGCTCAAACATAGGTATGGGAGCATCCTTGATAGCAGCTATCTCTGCTGCAACCTTGTCAAGCCCAGCAGCCATGGCTTTGGTAGATGAGAGAATGAGCACCGAAGGAACTGGCCTTCCCTTTGGACTTAGCAACAATCTTCTTGGTTGGCTTTTGTTTGGTGTCTTCGGTCTTATATGGGCTCTCTATTTTATATACGCTTCCTCCCTTGATGAGGATGAAGATTCTGGATTGTCTTTGTAA 396 0.4596 MATIIAGTSTSSIIRTSFVHKQPLGVSSHTVVAKVGRVRCSIEGKPDVQGSSSNIGMGASLIAAISAATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYFIYASSLDEDEDSGLSL* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2861 131 Pfam Photosystem II reaction centre W protein (PsbW) 1 131 IPR009806 GO:0009507|GO:0009523|GO:0015979
Mtr7g2861 131 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 131 - -
Mtr7g2861 131 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 131 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2861 Mtr-Chr7 45426680 45427460 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2861 K02721 - gmx:100526966 131.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2861 7 45426680 45427460 Mtr1g2455 1 35218097 35219350 PCT