Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2824 ATGGCACAGAGAAGCATTGAGATGCTGCTAAGCATGTTATTTGTTATGGTGGCTCTTAGGGGTGTCACAGTGGCACAAACCGACTCAAATTGCGCCAATGTGCTCATAAGTCTTTCTCCGTGCCTTGACTACATCACAGGACAGACCTCCACCCCTTCCTCTGGTTGCTGCTCGCAACTTGCCTCCGTGGTGGGGTCACAGCCACAATGTCTATGTGAGGTTGTTGATGGCGGTGCTTCATCTATTGCTGCTAGTCTTAACATCAATCAGACTCGTGCTTTGGCGCTCCCCATGGCTTGCAATATCCAAACACCTCCTATCAATACCTGCCCTGGCTCAACTACTTCGTCTTCTCTTCCAGCTCCGGCAGGTGTTTCTATTTCCAACATTCCAAATTCTCCTTCAGGGTATTTTACATCAACAACCGGAAGCAGTGGAAGTATCCGTGGCTCAACCTCATCTTATAGAACATCAAGTTCTGTGAAATTACAATGTTCTTTGCTTGTTCTGGTTATCATTGCAAATTTGACATTCACTTTCATGACCATGACTTAG 555 0.4631 MAQRSIEMLLSMLFVMVALRGVTVAQTDSNCANVLISLSPCLDYITGQTSTPSSGCCSQLASVVGSQPQCLCEVVDGGASSIAASLNINQTRALALPMACNIQTPPINTCPGSTTSSSLPAPAGVSISNIPNSPSGYFTSTTGSSGSIRGSTSSYRTSSSVKLQCSLLVLVIIANLTFTFMTMT* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2824 184 Gene3D - 28 108 IPR036312 -
Mtr7g2824 184 PANTHER LIPID TRANSFER PROTEIN 5 182 - -
Mtr7g2824 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 110 IPR036312 -
Mtr7g2824 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 5 182 IPR043325 -
Mtr7g2824 184 CDD AAI_LTSS 38 102 - -
Mtr7g2824 184 Pfam Probable lipid transfer 16 110 IPR016140 -
Mtr7g2824 184 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Mtr7g2824 184 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Mtr7g2824 184 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Mtr7g2824 184 SMART aai_6 31 110 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2824 Mtr-Chr7 44964154 44965384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2824 6 110 Lipid Metabolism Gene Families AT3G22600 50.476 1.72e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2824 - - cam:101512493 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2824 7 44964154 44965384 Mtr7g2824 7 44964154 44965384 ECH
Mtr1g2496 1 35775358 35776478 Mtr7g2824 7 44964154 44965384 PCT