Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2809 ATGGAGCTTAGCAAAGTAACACTAGAGATATTCACAAAACTAGAACAACAATGGCTATCAGTTTCACAATGTGGAACAACATCCAAAACTCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCTCCGGCGCTGCCTTGATCCACCTTGAGGATCAGATCCGCTTACAAACCAACGATCCTCACGCTCAAATCATTGATTACTTTGACATCATCACCGGCACTGGCATTGGTGCAATACTCGCTGCAATGATCACAGCTGATGATGGATTTGGTAGACCTCTCTATACTGCTAGAGATGCTGTGAATTTCATTGCTGACAGGAATCATGAATTCTATAAAATGAAATCCGTCGGTGTTTTCCGCCGGCGCCGTAGATTCTCAACGAAGAGCATTGAAAATTTGTTGAAGCGAGTTTTTCAAGGAAAAGAAAGCGAAGGTAAATCTTTGACGTTGAAAGATACGATTAAGCCTTTGCTTATTCCTTGCTATGATCTCAACACTTCAGCACCGTTCGTTTTCTCACGAGCCGATGCGTCGGAGTCACCGAGTTTCAACTTTGAGCTTTGGAAAGTGTGTCGCGCAACGTCATCAACTCCAAGTCTCTTCAAACCGTTTCAATTCGCTTCCGTTGATGGAAAAACCTCTTGCTCAGCCGTGGACGGTGGTTTGGTGATGAACAATCCGGCGGCAGCGGCTGTTACGCATGTTCTTCATAACAAGCGTGATTTCCCGTCGGTGAATAGTGTCGAGGACCTGATGGTTTTGTCCATCGGAAATGGAGCACCCGCGAACAGAGTGCATCGTGATGTTCGTGAATGTTCAACGTCGACAGTGGTTGACATTGCTCTTGACGGTGTTTCAGAAACCGTTGATCAGATGTTGGGAAATGCCTTCAGTTGGAACCGTACTGACTATGCGAGGATTCAGGCATTTGGTTTGGGAGGAAAGGGAAGTTGGGAAGAAACAGAGGTGTTGAACGAGAGAGTGTTACAGTCGTTACCGTTTGGTGGGAAACGGTTACTACAAGAAACTAACGGCAACAGAATTGAGAGGTTTGTGCAACGACTTGTTGCTACTGGAAAGTCTAGTTTGCCACCTAGTCCATGCAAGATTACGCCGTTAGTCTCGTGCTAA 1143 0.4619 MELSKVTLEIFTKLEQQWLSVSQCGTTSKTRILSIDGGGTTAIVSGAALIHLEDQIRLQTNDPHAQIIDYFDIITGTGIGAILAAMITADDGFGRPLYTARDAVNFIADRNHEFYKMKSVGVFRRRRRFSTKSIENLLKRVFQGKESEGKSLTLKDTIKPLLIPCYDLNTSAPFVFSRADASESPSFNFELWKVCRATSSTPSLFKPFQFASVDGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNSVEDLMVLSIGNGAPANRVHRDVRECSTSTVVDIALDGVSETVDQMLGNAFSWNRTDYARIQAFGLGGKGSWEETEVLNERVLQSLPFGGKRLLQETNGNRIERFVQRLVATGKSSLPPSPCKITPLVSC* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2809 380 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 33 236 IPR002641 GO:0006629
Mtr7g2809 380 SUPERFAMILY FabD/lysophospholipase-like 29 314 IPR016035 -
Mtr7g2809 380 Gene3D Cytosolic phospholipase A2 catalytic domain 22 367 - -
Mtr7g2809 380 PANTHER PATATIN 2 376 - -
Mtr7g2809 380 CDD Pat17_PNPLA8_PNPLA9_like 32 336 - -
Mtr7g2809 380 Pfam Patatin-like phospholipase 33 235 IPR002641 GO:0006629
Mtr7g2809 380 PANTHER PATATIN-LIKE PROTEIN 6 2 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2809 Mtr-Chr7 44792058 44793788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2809 1 377 Acyl Lipid Metabolism Gene Families AT3G63200 67.617 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2809 - - gmx:100806989 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2809 7 44792058 44793788 Mtr7g2809 7 44792058 44793788 ECH
Mtr7g2809 7 44792058 44793788 Mtr1g2506 1 35950048 35951873 PCT