Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2506 ATGGATCTCACTAAAGTCACACTAGACATCTTCTCCAAACTCGAACACAAATGGCTTTCTCATTGCAAAGAAGAAACAACCACCAAAACTCGCATTCTCAGCATTGACGGCGGAGGAACAACCGCCATTGTAGCCGGCGCTGCTTTAATCCATCTCGAAGATCAGATCCGTCTTCAAACCTCTGATCCTCACGCTCACGTCGTTGATTTCTTCGACATTGTCGCTGGTACCGGAATTGGCGCTATCCTCGCTGCAATGATCACTGCAGCCGATGCATTCGGAAGACCAATGTATACAGCTAGAGAATCCGTTCGTATTATCACAGAGAAAAACTCTCAACTCTACAAACGCAAATCAACCGGAGTATTTCGTCGCCGGTGCCGAAGATTCTCTTCAAAGAACATGGATAACGTGTTGAAAGAAGTGTTCGTCAGAAAACAAGATTCACGGTTGTTGACTTTAAAGGACACGTGTAAACCATTGCTTATACCTTGCTTTGACCTCAAGAGTTCAGCTCCATTCGTTTTTTCACGAGCCGACGCAACGGAATCTCCTAGCTTCAACTTCGAACTCTGGAAAGTATGCCGCGCCACGTCAGCAACACCTAACCATTTCAAACCTTTTGAATTCACTTCCGTCGATGGAAAAACCTCTTGCTCCGCCGTAGACGGTGGTTTAGTCATGAACAATCCTACCGCCGCCGCAGTCACGCATGTTCTACACAACAAACGTGATTTTCCAACGGTGAACGGCGTGGAGGATCTTTTGGTTCTTTCATTGGGAAACGGATCGTCGAATTCGAAGACACGTGAGAACGAAAACCGCACGTGCTCAACGCCGTTAATGGTTGACATTGTTCTTGACGGCGTTTCCGAGACGATTGACCAAATGCTTGGAAACGCATTCTGTTGGAATCGTACGGATTACGTCAGAATTCAGGCGTTTGGTTTGGGAAGTGAAGAGGAAGTGTTGAAGGAAAGAGGATTGGAGTCGTTACCGTTTGGAGGGAAACGGTTATTGACGGAGACTAACGGAAATAGAATCGGAAGCTTCGTGCAACGTCTTGTTGCTAATGGAAAGCCAAGTCCACCTTTCAGTCCTTGCAAGGATTCAGTTGTTACATCTCTCGCTAATGGACGCTAG 1143 0.4663 MDLTKVTLDIFSKLEHKWLSHCKEETTTKTRILSIDGGGTTAIVAGAALIHLEDQIRLQTSDPHAHVVDFFDIVAGTGIGAILAAMITAADAFGRPMYTARESVRIITEKNSQLYKRKSTGVFRRRCRRFSSKNMDNVLKEVFVRKQDSRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADATESPSFNFELWKVCRATSATPNHFKPFEFTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPTVNGVEDLLVLSLGNGSSNSKTRENENRTCSTPLMVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSEEEVLKERGLESLPFGGKRLLTETNGNRIGSFVQRLVANGKPSPPFSPCKDSVVTSLANGR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2506 380 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 380 - -
Mtr1g2506 380 SUPERFAMILY FabD/lysophospholipase-like 29 319 IPR016035 -
Mtr1g2506 380 CDD Pat17_PNPLA8_PNPLA9_like 32 314 - -
Mtr1g2506 380 Pfam Patatin-like phospholipase 33 235 IPR002641 GO:0006629
Mtr1g2506 380 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 33 236 IPR002641 GO:0006629
Mtr1g2506 380 Gene3D Cytosolic phospholipase A2 catalytic domain 16 361 - -
Mtr1g2506 380 PANTHER PATATIN-LIKE PROTEIN 6 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2506 Mtr-Chr1 35950048 35951873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2506 1 380 Acyl Lipid Metabolism Gene Families AT3G63200 70.466 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2506 - - gmx:100795441 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2506 1 35950048 35951873 Mtr1g2506 1 35950048 35951873 ECH
Mtr7g2809 7 44792058 44793788 Mtr1g2506 1 35950048 35951873 PCT