Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1743 ATGGGTGTAATGTCTGAGAAACCCCTTCAAGAACTTTCTCTTCACTCTACAGACACCACATTTTCTCCTCCTTCACCTAAGAGGTTGGAAGGAAAAATAGCTATTGTAACAGGTGGAGCTAGAGGAATTGGAGAAGCAACGGTGAGAATTTTTGTAAAACATGGTGCAAAAGTGGTAATTGGTGATGTTGAAGATGAACTTGGAATCATGCTTGCAAATTCACTCTCTCCATCAGCTATTTATGTCCATTGTGATGTTAGTGTTGAAAAAGATGTTGAAAATTTAGTCACTTCAACAATTTCTCACTATGGAAAACTTGACATAATGTTCAACAATGCTGGCTTTCTTGGAAACCAATCCAAGAACAAAAGCATTGTGAACTTCGACACCGAGGAATTCGACCGAGTCATGAATGTTAATGTTAAAGGTGTTGCTTTAGGTATGAAACATGCTGCAAAGGTTATGATACCTAGAGGAAATGGATGCATAGTATCCACTTCTAGTGTAGCTGGAGTTTTAGGAGGACTTGGTCCACATGCTTATACAGCTTCAAAGCATGCTATAGTTGGATTAACAAAGAATGCTTCTTGTGAATTGGGAAAATATGGTATAAGGGTTAATTGCATTTCTCCATTTGGTGTTGCAACATCTATGCTTGTGAATGCTTGGAGAAATGGAGAAGATGAAGTTGATGAAGGAATCAATTTTGGATTGCCTTTAATTGAAGAGGTTGAGAAAATGGAGGAATTTGTTAGAGGGATTGGTAATTTGAGAGGAACAACTTTAAAGACTCAAGATATTGCTGAGGCTGTTCTTTATCTTGCTAGTGATGAATCTAAGTATGTTAGTGGTCATAATCTAGTTGTTGATGGTGGAATTACTTCCTCAAGAAATTGTATTGGTTTGTGA 909 0.374 MGVMSEKPLQELSLHSTDTTFSPPSPKRLEGKIAIVTGGARGIGEATVRIFVKHGAKVVIGDVEDELGIMLANSLSPSAIYVHCDVSVEKDVENLVTSTISHYGKLDIMFNNAGFLGNQSKNKSIVNFDTEEFDRVMNVNVKGVALGMKHAAKVMIPRGNGCIVSTSSVAGVLGGLGPHAYTASKHAIVGLTKNASCELGKYGIRVNCISPFGVATSMLVNAWRNGEDEVDEGINFGLPLIEEVEKMEEFVRGIGNLRGTTLKTQDIAEAVLYLASDESKYVSGHNLVVDGGITSSRNCIGL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1743 302 Pfam Enoyl-(Acyl carrier protein) reductase 38 294 - -
Mtr7g1743 302 MobiDBLite consensus disorder prediction 1 25 - -
Mtr7g1743 302 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 4 302 - -
Mtr7g1743 302 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 4 302 - -
Mtr7g1743 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 294 IPR036291 -
Mtr7g1743 302 CDD secoisolariciresinol-DH_like_SDR_c 28 294 IPR045309 GO:0016616
Mtr7g1743 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 104 115 IPR002347 -
Mtr7g1743 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Mtr7g1743 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 200 IPR002347 -
Mtr7g1743 302 MobiDBLite consensus disorder prediction 10 24 - -
Mtr7g1743 302 Gene3D - 22 300 - -
Mtr7g1743 302 PRINTS Glucose/ribitol dehydrogenase family signature 33 50 IPR002347 -
Mtr7g1743 302 PRINTS Glucose/ribitol dehydrogenase family signature 104 115 IPR002347 -
Mtr7g1743 302 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Mtr7g1743 302 PRINTS Glucose/ribitol dehydrogenase family signature 181 200 IPR002347 -
Mtr7g1743 302 PRINTS Glucose/ribitol dehydrogenase family signature 202 219 IPR002347 -
Mtr7g1743 302 PRINTS Glucose/ribitol dehydrogenase family signature 257 277 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1743 Mtr-Chr7 33234628 33236244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1743 5 293 Acyl Lipid Metabolism Gene Families AT1G24360 27.517 2.72e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1743 - - gmx:100775210 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1743 7 33234628 33236244 Mtr7g1743 7 33234628 33236244 ECH
Mtr4g0834 4 10720052 10721631 Mtr7g1743 7 33234628 33236244 PCT