Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0834 ATGGCAAGTTTGAGAGTTGCAATTGTGGCTGCAATTATGTGCATGGTGGTGGTTAGTGCACCAATGGCAGAGGCAGTCACATGTGGACAAGTAGTTGGTTTCCTTACTCCATGTATTACTTATCTTCAAGGTGGTCCTGGTCCATCTGCAGCATGCTGTGGTGGAGTGAAGAAACTTAACGGTGCCGCCAACACCGGCCCCGCCCGCAAGACTGCTTGCAACTGCTTGAAAAGGGCTGCTGGTAACATTGCTCGCTTGAATAACAACCAAGCTGCTGCTCTCCCTGGCAAATGTGGTGTTAACATTCCCTATAAGTTTAGCACTTCTACCAACTGTAATAGCATCAGGTTCTAA 354 0.4802 MASLRVAIVAAIMCMVVVSAPMAEAVTCGQVVGFLTPCITYLQGGPGPSAACCGGVKKLNGAANTGPARKTACNCLKRAAGNIARLNNNQAAALPGKCGVNIPYKFSTSTNCNSIRF* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0834 117 PANTHER - 4 113 IPR000528 GO:0006869|GO:0008289
Mtr4g0834 117 Gene3D - 25 117 IPR036312 -
Mtr4g0834 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 4 113 - -
Mtr4g0834 117 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Mtr4g0834 117 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Mtr4g0834 117 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Mtr4g0834 117 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Mtr4g0834 117 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Mtr4g0834 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 115 IPR036312 -
Mtr4g0834 117 Pfam Protease inhibitor/seed storage/LTP family 28 112 IPR016140 -
Mtr4g0834 117 ProSitePatterns Plant lipid transfer proteins signature. 94 115 IPR000528 GO:0006869|GO:0008289
Mtr4g0834 117 CDD nsLTP1 26 113 - -
Mtr4g0834 117 SMART aai_6 28 112 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0834 Mtr-Chr4 10720052 10721631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0834 16 116 Acyl Lipid Metabolism Gene Families AT5G59320 49.505 5.05e-28 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0834 - - mtr:MTR_4g428370 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0834 4 10720052 10721631 Mtr7g1743 7 33234628 33236244 PCT