Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1719 ATGCAGAAATTTCATCTGGGTCTTTCTCAAATCCCTCATTCACCATCCATGGAAGAAGAGCACTCTTCATCTTCAATGTCAATCCTAAGCACACCATTTCTAGAAACTCCAAGAAAAACTCCCTCAAAACCAAACAAAAGAACCATAGTCACAACATTAATGGAAGCTGCAACTTTCACATCTTCTTCATTCAAAGAAGACACATATTTCATTTCCAACCTCAAATCCTCAGAGAAAAAAGCATTGAAACAGTTGAAGGAAAAGCTCTTAGCTTCTGATGAAATTACCAACAATGGTTCCATGTGGGGTGTTTGTTTGATTAAAGGTGATGATGTTGCTGATGTGTTACTCTTGAAGTTTCTTAGAGCTAGAGACTTTAGAGTCAATGATGCTTACACTATGCTTGTGAAGTGTCTTTCTTGGAGAAAAGAATTTGGTGCTGAAAATGTTGTGGATGAAGATTTGGGATTCAAAGAGCTTGAAGGTGTTGTTGCTTTCACTCATGGGTTTGATAGAGAGGGACATCCTGTGTGTTATAATCATTATGGTGTGTTCAAAGATAAGGAAATGTATGAGAGGGTTTTTGGTGATGAAGAGAAGTTGAAGAAGTTTTTGAGGTGGAGGGTTCAAGTTCTTGAGAGAGGGATCAAGCTTTTACAGTTTAAACCTGGTGGGGTGAATTCTTTGATTCAAGTCACTGATCTTAAGGATATGCCTAAGAGTGAGTTAAGGGTTGTGTCAAATCAAATCATGTCATTGTTTCAAGATAACTATCCTGAAATGGTTGCTCGTAAGATTTTCATCAATGTACCATGGTATTTCAGCATGTTGTATTCAATGTTCAGTCCATTTCTGACTCAAAGAACTAAGAGCAAGTTTGTGATCTCTAAGGAAGGAAATGCTGCTGAAACACTCTACAAATTTATAAGGCCTGAGAATATTCCTATTCAATATGGTGGATTGAGTCGACCTAGTGATTTTCAGAATGGTCCCCCAAAACTAGCTTCTGAGTTCACTGTTAAAGGAGGAGAAAAAGTGAACATACAAATAGAAGGAGTTGAGAGTGGTGCAACAATCAAGTGGGAGATTGTAGTTGGAGGCTGGGATTTGGAATACAGTGCTGAATTTGTTCCAAATGCAGAAGCTAGCTACACTATAGAAGTTGAAAAGGCAAGGAAAGTTAATGCATCAGAAGAAGCAATTCAGAATTCATACACATCAAAAGAAGCAGGCATAATGGTACTCTCGGTCGATAACTCTGCGTCTAGGAAGAAAAAAGTCGCTGCTTATCGCTATTTTGTTCGAAAATACAACAGCAATACACCATCTGATATGCAATTAAGCCTCAAAATCAAATAG 1359 0.3797 MQKFHLGLSQIPHSPSMEEEHSSSSMSILSTPFLETPRKTPSKPNKRTIVTTLMEAATFTSSSFKEDTYFISNLKSSEKKALKQLKEKLLASDEITNNGSMWGVCLIKGDDVADVLLLKFLRARDFRVNDAYTMLVKCLSWRKEFGAENVVDEDLGFKELEGVVAFTHGFDREGHPVCYNHYGVFKDKEMYERVFGDEEKLKKFLRWRVQVLERGIKLLQFKPGGVNSLIQVTDLKDMPKSELRVVSNQIMSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPENIPIQYGGLSRPSDFQNGPPKLASEFTVKGGEKVNIQIEGVESGATIKWEIVVGGWDLEYSAEFVPNAEASYTIEVEKARKVNASEEAIQNSYTSKEAGIMVLSVDNSASRKKKVAAYRYFVRKYNSNTPSDMQLSLKIK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1719 452 SMART sec14_4 159 323 IPR001251 -
Mtr7g1719 452 ProSiteProfiles GOLD domain profile. 302 436 IPR009038 -
Mtr7g1719 452 SUPERFAMILY CRAL/TRIO N-terminal domain 69 153 IPR036273 -
Mtr7g1719 452 PRINTS Cellular retinaldehyde-binding protein signature 116 138 - -
Mtr7g1719 452 PRINTS Cellular retinaldehyde-binding protein signature 278 297 - -
Mtr7g1719 452 PANTHER PATELLIN-6 32 438 - -
Mtr7g1719 452 MobiDBLite consensus disorder prediction 1 28 - -
Mtr7g1719 452 SMART CRAL_TRIO_N_2 113 138 IPR011074 -
Mtr7g1719 452 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 337 446 IPR036598 -
Mtr7g1719 452 Gene3D - 154 332 IPR036865 -
Mtr7g1719 452 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 153 326 IPR001251 -
Mtr7g1719 452 Gene3D GOLD domain 333 434 - -
Mtr7g1719 452 Pfam CRAL/TRIO, N-terminal domain 81 137 IPR011074 -
Mtr7g1719 452 Gene3D - 71 144 - -
Mtr7g1719 452 SUPERFAMILY CRAL/TRIO domain 158 323 IPR036865 -
Mtr7g1719 452 PANTHER PATELLIN-1 32 438 IPR044834 GO:0008289
Mtr7g1719 452 CDD SEC14 157 321 IPR001251 -
Mtr7g1719 452 Pfam CRAL/TRIO domain 161 320 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1719 Mtr-Chr7 32793995 32796978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1719 117 315 Acyl Lipid Metabolism Gene Families AT1G55840 27.273 5.57e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1719 - - cam:101508309 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1719 7 32793995 32796978 Mtr7g1719 7 32793995 32796978 ECH
Mtr7g1719 7 32793995 32796978 Mtr4g0323 4 3909738 3913056 PCT