Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0323 ATGCAAAGATTTCATCTGGGTTTCTCTCAAAATCCAAACTTGATGATGGATTCTTCTTCATTATCTCCTTTGTCTCTTCAAACCCAAAAATCACCTTTTCAAAACTTACCTGAAGAATCCTCACCAAAACAAACCAAAAGAAGCTTACTTTCATCTCTAATGGGTACTAACAACATCACTTCTTCAAACCTTAGAACCCCTTCTTTTGAAGAAGATAACTACTTTGTCACCCTTCTCAAATCGTCAGAGAAAAAAGCACTTCAAGACCTCAAAAAAACCCTCCTTGATGTCACAAATGAAAAGAACTCTCCCAATGGTGAAGTTTCCATGTGGGGTATTCCTCTTCTTGGTGGAGATGACAGAGCTGATGTAATACTCTTGAAGTTTCTAAGAGCAAGAGATTTCAGAGTTAATGAAGCATTAAACATGATTACAAAGTGTTTAGCTTGGAGAAAAGAGTTTAATGCTGACACAATAGTTGAAGAAGATTTGAGTCAGTTCAAGGAGCTTGAAGGTGTTATAGCTTATATGCAAGGCTATGACAAAGAGGGTCATCCTGTTTGTTACAATGCTTATGGTTTGTTTAGAGATAAAGATATGTATGAGAGGATTTTTGGTGATGAAGAGAAGCTTAAGAAGTTTCTTAGGTGGAGGGTTCAAGTTCTTGAAAGAGGTATTAGGCTTCTTCATTTTAAGCCTGGTGGTGTTAATTCTCTTATTCAAGTTACCGATCTTAAAGATATGCCTAAAAGAGAGTTAAGAGTTGCTTCTAACCATATTCTCTCACTCTTTCAAGATAACTACCCAGAAATGGTTGCTAGAAAGATTTTCATCAATGTGCCATGGTACTTCAGCATGTTGTATTCAATGTTTAGTCCATTTTTGACACAAAGGACTAAGAGCAAGTTTGTGATCTCAAAAGAAGGAAATGCTGCTGAGACACTCTACAAATTCATTAGACCTGAGGATATTCCTGTTCAGTATGGAGGGTTAAGTTTGCCCAGTGATTTGCAAAATGGTCCCCCAAAACCAGCTTCTGAATTCACTGTCAAAGGAGGGGAGAAAGTGAATATACAAATAGAAGGAATTGAGGGAGGTGCAACTATCACTTGGGATATTGTTGTTGGAGGCTGGGACTTAGAATACAGTGCTGAGTTTGTACCAAATGCTGAAGGTAGCTACACTATAGCAGTTGAGAAACCAAGGAAGATTGGAGCCTCAGAAGAAGCAATGCACAACTCATTCACATCGAAAGAATCCGGCAAAATGATACTCTCGGTGGACAACACTGCCTCAAGGAAGAAAAAAGTTGCTGCTTATCGTTATGTTGTCCGAAAATGCGCCACCACTTGA 1353 0.3851 MQRFHLGFSQNPNLMMDSSSLSPLSLQTQKSPFQNLPEESSPKQTKRSLLSSLMGTNNITSSNLRTPSFEEDNYFVTLLKSSEKKALQDLKKTLLDVTNEKNSPNGEVSMWGIPLLGGDDRADVILLKFLRARDFRVNEALNMITKCLAWRKEFNADTIVEEDLSQFKELEGVIAYMQGYDKEGHPVCYNAYGLFRDKDMYERIFGDEEKLKKFLRWRVQVLERGIRLLHFKPGGVNSLIQVTDLKDMPKRELRVASNHILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLSLPSDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKIGASEEAMHNSFTSKESGKMILSVDNTASRKKKVAAYRYVVRKCATT* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0323 450 Pfam CRAL/TRIO domain 171 330 IPR001251 -
Mtr4g0323 450 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 161 336 IPR001251 -
Mtr4g0323 450 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 347 444 IPR036598 -
Mtr4g0323 450 Gene3D - 77 153 - -
Mtr4g0323 450 CDD SEC14 164 331 IPR001251 -
Mtr4g0323 450 Gene3D - 156 341 IPR036865 -
Mtr4g0323 450 Pfam CRAL/TRIO, N-terminal domain 92 146 IPR011074 -
Mtr4g0323 450 SMART CRAL_TRIO_N_2 122 147 IPR011074 -
Mtr4g0323 450 SMART sec14_4 169 333 IPR001251 -
Mtr4g0323 450 MobiDBLite consensus disorder prediction 15 49 - -
Mtr4g0323 450 PANTHER PATELLIN-1 31 448 IPR044834 GO:0008289
Mtr4g0323 450 ProSiteProfiles GOLD domain profile. 312 446 IPR009038 -
Mtr4g0323 450 Gene3D GOLD domain 342 444 - -
Mtr4g0323 450 SUPERFAMILY CRAL/TRIO N-terminal domain 80 163 IPR036273 -
Mtr4g0323 450 PANTHER PATELLIN-6 31 448 - -
Mtr4g0323 450 SUPERFAMILY CRAL/TRIO domain 169 331 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0323 Mtr-Chr4 3909738 3913056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0323 126 325 Acyl Lipid Metabolism Gene Families AT1G55840 27.014 1.03e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0323 - - gmx:100809944 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0323 4 3909738 3913056 Mtr4g0323 4 3909738 3913056 ECH
Mtr7g1719 7 32793995 32796978 Mtr4g0323 4 3909738 3913056 PCT