Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2125 ATGGGGATCCCTGGAATGAACAATCAGAGTAATGGAAAACAATGGTTAGGGATAACTGAGCCAATTTCATTGGCTGGACCAACTGAGGAAGATGTGACAAAGACTCATGAACTTGAAAAGTACTTGCAAGGCGCTGGATTGTATGAGAGTCAGCAGGAGGCAGTTGGTAGGGAGGAAGTGCTTGGCAGACTGGACCAGATTGTGAAGATTTGGGTGAAAACCATTAGCAGGGCGAAGGGATTCAATGAACAACTGGTGCAAGAAGCAAATGCCAAAATTTTCACTTTTGGCTCCTATCGGCTAGGGGTGCATGGTCCTGGAGCGGATATAGATACCCTTTGTGTAGGACCTAGACATGCAACCAGAGATGAAGATTTCTTTGGTGAGCTACAGAAGATGCTATCTGAGATGGAGGAAGTAACTGAATTGCACCCTGTGCCTGATGCTCATGTCCCTGTGATGAAATTCAAGTTTAATGGAGTTTCTGTAGATCTCCTGTATGCAAGATTGGCATTGTGGGTTATTCCTGAAGACTTAGATATATCACAGGAATCAATATTACAAAATGTAGATGAACAAACTGTTCTCAGTCTCAACGGATGTAGAGTAACTGATCAAGTCTTGCGTTTAGTTCCAAATATTCAGAATTTTCGCACAACATTGAGGTTCATGAGGTTTTGGGCAAAGCGTCGTGGTGTTTATTCAAATGTTGCTGGTTTTCTTGGTGGTATAAATCTGGCATTGCTTGTTGGTCGAATATGCCAGCTTTATCCTAACGCACTTCCAAATATGTTGGTGTCTCGGTTCTTTAGAGTATATACTCAGTGGCGATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTATCGGTTTGGGATCCTAGAAGAAATCCCCGAGATAGATATCATCTAATGCCAATAATTACTCCTGCTTATCCTTGCATGAATTCTACTTACAATGTGACAACTAGTACGCTGCGTATTATGTCAGACGAGTTCAAGAGGGGAACTGAAATATGCGAGGCTATGGAGGCTAGCAAAGCTGATTGGGATACTCTTTTTGAGCCGTACCCATTTTTTGAAGCTTACAAGAATTACCTACAAATAGACATAACAGCAGAGAATCCAGACGACCTTAGACAATGGAAAGGTTGGGTTGAGTCTCGTCTCCGCCAGTTGACATTGAAGATTGAGAAGTACACTTATGGTATGCTTCAGTGTCACCCGTATCCTGGCGAATTTTCAGACAAATCTAGATCCTTCCACCAATGTTACTTTATGGGTCTGCAGCGTAAGCAAGGTGTTCCGGTAAGCGAAGGTGAACAGTTTGATATAAGGCAAACTGTAGAAGAATTCAAGCATAATGTAAACGCTTACACTGCATGGAAACCTGGAATGGACATCCGCGTCTCCCATGTGAAACGTCGTAACATACCAAACTTCATATTTCCTGGCGGTGTTCGACCTTCCGTCCCGTCTAGAGTAAACGGTGAGAATAGACGAAGTTCGAAATCAAGGGTTGCTGGTCAAAGTCAATCTGAAAAGTCTCAAGGAGGTAAAGCGGTTGTACTTGGAGCCGATGATGAAAGGAAGAGAAAGCGATTGGAGGATAATAATAACTCAAGGGTTTCAAAGTCCTCTGCATCTGTATCCCCTCCCAATAGGAATGTTCCTGAAGATAGAAATCCTTTTAGTGCTACTAGTTCTTGTTCTATGAAATTTGATGACTCTGAAGTCAATAGTATGGGTGATCAAAAGAGCGAGAAACTCTGTCTGAAATCGGTTGGTGAGATTCCTGCTGGTGATAGTGTAACCAATGGATCAGCGACGGATAACAAACAACTTGATGCTCCTGATACATCTAACACTAAAGAAGAAGAACGTCTAGCCATCGAGCATATTATGGCTGGTCCGTATGAAGCGCATCAAGCTTTGACAGAAGAACCTGATGAGCTTGAACAAGATATGGGGTATAGAAATCAAGTCAATGATAATGGTGGAAGTGTGAAAAGCAACAATTTTGACTCTTCAAATCCAAATCCTGTGGTAGTGGAAGATCAAGTTATTTCAAAGGAAACCGTATGTTCAACTCATTCATTCTGTAATGGAGGCTTGGAGGAGCTTGAGCCTGCTGAGCTGACAGCACCATTGTTTTGTGGGATTCCTGCTCCTGTACCACAGAAGAAGCCTCTTATCAGGTTGAACTTCACTTCCTTGGGGAAAGCAGTGAATAAAAGCACGTAA 2259 0.4263 MGIPGMNNQSNGKQWLGITEPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEVLGRLDQIVKIWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQKMLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFHQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFIFPGGVRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGKAVVLGADDERKRKRLEDNNNSRVSKSSASVSPPNRNVPEDRNPFSATSSCSMKFDDSEVNSMGDQKSEKLCLKSVGEIPAGDSVTNGSATDNKQLDAPDTSNTKEEERLAIEHIMAGPYEAHQALTEEPDELEQDMGYRNQVNDNGGSVKSNNFDSSNPNPVVVEDQVISKETVCSTHSFCNGGLEELEPAELTAPLFCGIPAPVPQKKPLIRLNFTSLGKAVNKST* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2125 752 MobiDBLite consensus disorder prediction 603 629 - -
Mtr6g2125 752 Gene3D - 17 359 - -
Mtr6g2125 752 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 682 - -
Mtr6g2125 752 SUPERFAMILY Nucleotidyltransferase 17 210 IPR043519 -
Mtr6g2125 752 SUPERFAMILY PAP/OAS1 substrate-binding domain 212 361 - -
Mtr6g2125 752 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 362 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Mtr6g2125 752 MobiDBLite consensus disorder prediction 529 545 - -
Mtr6g2125 752 Gene3D Poly(A) polymerase predicted RNA binding domain 363 478 - -
Mtr6g2125 752 MobiDBLite consensus disorder prediction 500 523 - -
Mtr6g2125 752 Pfam Poly(A) polymerase predicted RNA binding domain 364 424 IPR007010 GO:0003723|GO:0043631
Mtr6g2125 752 Pfam Poly(A) polymerase predicted RNA binding domain 426 494 IPR007010 GO:0003723|GO:0043631
Mtr6g2125 752 CDD NT_PAP_TUTase 57 211 - -
Mtr6g2125 752 Pfam Poly(A) polymerase central domain 17 361 IPR007012 GO:0004652|GO:0043631
Mtr6g2125 752 MobiDBLite consensus disorder prediction 663 685 - -
Mtr6g2125 752 MobiDBLite consensus disorder prediction 546 583 - -
Mtr6g2125 752 PANTHER POLY A POLYMERASE 1 682 - -
Mtr6g2125 752 MobiDBLite consensus disorder prediction 606 622 - -
Mtr6g2125 752 Gene3D Beta Polymerase, domain 2 49 205 IPR043519 -
Mtr6g2125 752 Pfam Nucleotidyltransferase domain 76 170 IPR002934 GO:0016779
Mtr6g2125 752 MobiDBLite consensus disorder prediction 486 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2125 Mtr-Chr6 37991921 37998521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2125 K14376 - gmx:100816915 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3843 8 49095822 49102277 Mtr6g2125 6 37991921 37998521 ECH
Mtr6g2125 6 37991921 37998521 Mtr6g2125 6 37991921 37998521 ECH