Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1815 ATGATCACTTTAACAGATTTCTACCATGTCATGACAGCAATGGTGCCACTTTATGTAGCTATGATCTTAGCTTATGGATCAGTAAAATGGTGGAAAATATTTTCACCTGATCAATGTTCAGGAATCAACCGTTTTGTTGCACTCTTTGCAGTTCCACTTCTTTCATTCCATTTCATAGCATCAAACAATCCTTACAAAATGAACCTTAGGTTTTTAGCAGCTGATACACTTCAAAAACTCATAATCTTATGTCTTCTTGCTATTTGGAGCAATTTCTCCAAAAGGGGTTGTTTAGAATGGACTATAACACTCTTTTCACTCTCAACACTTCCAAACACTTTGGTTATGGGAATTCCTTTACTTAAAGGAATGTATGGTGAATTTTCAGGTAGTTTAATGGTACAAATTGTTGTTCTTCAATGTATCATTTGGTATACTTTGATGCTTTTCATGTTTGAGTTTAGAGGAGCAAGGTTGTTGATTTCTGAACAGTTTCCTGACACTGCTGGTTCCATTGTTTCAATCCATGTTGATTCTGATGTCATGTCATTGGATGGTAGAACACCATTGGAAACTGATGCTGAAATCAAAGAAGATGGTAAACTTCATATCACTGTTAGAAAATCAAATGCTTCAAGATCAGATATTTACTCAAGAAGATCACAAGGTCTTTCTTCAAATACTCCAAGACCTTCTAATCTTACTAACGCTGAAATTTACTCTTTGCAATCTTCTAGAAACCCTACACCAAGAGGTTCTAGTTTTAATCATACTGATTTTTATTCTATGATGGGTGGTGGAAATGGAAGAAACTCAAACTTTGGTGCTAATGATGTTGTTAATAACTATGGTTTATCTGCTAATTCAAGAGGTGTTACTCCAAGACCTTCTAATTATGAAGAAGAAGCTAATAATAATGCTAAGAAATTCAAAAACTATCCTGCACCTAATCCAGGAATGTTTTCTCCTACTAATAATAATAATGGTAGCAAAAATCTTGGTTCTAATGTTAGTGTTAATGCTAAGAAGAGTAATGGTCAAAGTCAACAGAAACAAGAAGATCTTCATATGTTTGTTTGGAGTTCTAGTGCTTCACCTGTCTCTGATGTGTTTGGTGGACATGACTTTGGTGCTCATGATCAGAAAGAAGTTAAATTGAATGTGTCTCCTGGAAAAGTGGAGGGTCATAGAGAAACTCAAGAGGACTATTTGGAGAAAGATGAATTCAGCTTTGGTAATAAAGGGATGGAAAGGGAAATGAATCAACATGAAGGAGGTGAGAAAGGTGGAGATGGAAAATCAAAAGTTATGCCACCAGCTAGTGTGATGACAAGGCTTATATTGATTATGGTTTGGAGAAAACTTATCAGAAATCCAAACACTTATTCTAGCTTAATTGGTCTCACTTGGTCTTTGGTTTCATTCAGGTATCATATTGAAATGCCTGCCATTATAGCAAAGTCTATTTCCATTCTGTCAGATGCAGGACTTGGCATGGCTATGTTCAGTCTTGGTTTGTTCATGGCTTTGCAACCAAAAATCATAGCATGTGGAAATTCCATTGCAGCTTTTTCAATGGGTGTGAGATTCCTTGTTGGTCCAGCTGTCATGGCAGCTGCTTCATTTGCTGTTGGACTCAAAGGTGTTCTCTTTCATGTTGCCATTGTTCAGGCAGCTCTTCCACAAGGAATTGTCCCATTTGTCTTTGCTAAAGAATATAATGTACATCCTGATATTCTAAGCACAGGTGTCATTTTTGGAATGTTGATTGCATTACCCATTACTCTTGTGTACTACATTTTAATGGGGCTATGA 1815 0.3636 MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLISEQFPDTAGSIVSIHVDSDVMSLDGRTPLETDAEIKEDGKLHITVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMGGGNGRNSNFGANDVVNNYGLSANSRGVTPRPSNYEEEANNNAKKFKNYPAPNPGMFSPTNNNNGSKNLGSNVSVNAKKSNGQSQQKQEDLHMFVWSSSASPVSDVFGGHDFGAHDQKEVKLNVSPGKVEGHRETQEDYLEKDEFSFGNKGMEREMNQHEGGEKGGDGKSKVMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRYHIEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIAAFSMGVRFLVGPAVMAAASFAVGLKGVLFHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILMGL* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1815 604 TIGRFAM 2a69: auxin efflux carrier 1 604 IPR014024 -
Mtr6g1815 604 MobiDBLite consensus disorder prediction 213 234 - -
Mtr6g1815 604 Pfam Membrane transport protein 9 599 IPR004776 GO:0016021|GO:0055085
Mtr6g1815 604 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 1 604 - -
Mtr6g1815 604 MobiDBLite consensus disorder prediction 308 350 - -
Mtr6g1815 604 MobiDBLite consensus disorder prediction 318 350 - -
Mtr6g1815 604 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1815 Mtr-Chr6 33038281 33043828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1815 1 595 Organic Solute Cotransporters AT1G73590 71.065 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1815 K13947 - gmx:100499637 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3888 8 49496434 49499125 Mtr6g1815 6 33038281 33043828 PCT