Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1646 ATGGCCTTAGAAACTTTACTCACAAGATTCAAAACAGCATTTTCAACCACTTTCAACTCAATTCAACCCAAAACGACACCGTCTTCAAACCCAAACCCAAAACGCATCGCCGTTTTAGCCTTCGAAGTCGCCGGAGTAATGTCGAAGCTTCTTCATCTCTGGCAATCACTTTCCGACGCTAACATAATCCGTCTTCAAAACGACGTCGTTACACTTGAAGGTATTTCGAAGCTAATCTCAAGCGACAAGTCGTTTCTGTTAAAACTCGCCGTCGCTGAATTTTGCGACTCGCTTCGTCTCGTCACTAACTCCGTCGCTAAATTTAGTCTTAATTGCAATGACCCATCACTCAAATCCTTCAACCAAGTTTTCACTGAGTTTGTTGAATCAGGTTTTGACTCGTTTGGGTGGAAACTCATAACCCCAAAAGAGATTGAATCCAAACATAGAAGAATGGAACGTTACGTGTCTCTCACGTTATCTCTTCATAGAGAAATTGATGAGCTTTCACTTTTGGAAAGCACTTTGAAAAAAACACTTCTCAACAACAATAACAAGTTCAAGAACAAAATCAGTGAGCTTGAACACAAGATTGTGTGGCAGAAACAAGAGGTAAAGAATTTGAAAGAAAAATCTTTGTGGAATAAAGGTTTTGATAATGTTGTTTTGTTGTTAGCAAGGTTTGTTTTTACTTCGTTAGCAAGGATTAAGGTTGTTTTTGGTGTTGGAAATGGAGACAGTTTACCTTATTTATCACGAAGTTTATCAGCATCTGCTAGTGTTTATCCTTCTGATTATAAAGATCATAGCTTTGTATCTGGGCCGTTGAAAAGTCAGGTGTCTGTGTCTGAGTCCGTGGTTCATAGAAAAAGTTTGAAAATTGATGTTTATCCATATGATCATCAAAAAGATCAAAAATTTGTATCAGGGCCGTTGAAAAGTCAGGTGTCTGTGTCTGAGTCTGTGCTGAATAGAAAATGTTTGAAACTTGACGAGACAAAAGTGGATTTAGGAAATGGGTTTTTTGAGTCAAATTGTGGAGTGTTGAAACCACCAAAAGGTAGTTTAGGTGATTCAGGTTTGTCTTTACATTATGCTAATTTGATTATTGTTATGGAGAAGATGATAAAATCACCTCAATTAGTTGGTGTTGATGCAAGAGATGATTTGTATGCTATGTTACCAAATAGTATAAGATCATCATTGAGGTTAAGGTTAAAAGGGTCAATTGGATTTTCTGCTTGTGATCCTTTATTGGCTAATGAATGGAAAAATGCTTTGGGAAGGATACTTTGTTGGTTGTTACCATTGGCACAGAATATGATTAGGTGGCAAAGTGAAAGGAGTGTTGAAGAGAAGAGTTTGGTTCCTAAGAAATCAAATGTTTTGCTTTTGCAAACTTTGGTTTTTGCTGATAAGGCGAAGACAGAAGCTGCTATAACTGAATTGCTCGTTGGTTTGAATTATGTTTGGAGGTTTGAGAGGGAAATGACGGCTAAGGCTTTGTTTCAATGTACCGATAATTTCAATGGGTATTTGAGTTTGTACAAACCTAGCTAA 1560 0.3737 MALETLLTRFKTAFSTTFNSIQPKTTPSSNPNPKRIAVLAFEVAGVMSKLLHLWQSLSDANIIRLQNDVVTLEGISKLISSDKSFLLKLAVAEFCDSLRLVTNSVAKFSLNCNDPSLKSFNQVFTEFVESGFDSFGWKLITPKEIESKHRRMERYVSLTLSLHREIDELSLLESTLKKTLLNNNNKFKNKISELEHKIVWQKQEVKNLKEKSLWNKGFDNVVLLLARFVFTSLARIKVVFGVGNGDSLPYLSRSLSASASVYPSDYKDHSFVSGPLKSQVSVSESVVHRKSLKIDVYPYDHQKDQKFVSGPLKSQVSVSESVLNRKCLKLDETKVDLGNGFFESNCGVLKPPKGSLGDSGLSLHYANLIIVMEKMIKSPQLVGVDARDDLYAMLPNSIRSSLRLRLKGSIGFSACDPLLANEWKNALGRILCWLLPLAQNMIRWQSERSVEEKSLVPKKSNVLLLQTLVFADKAKTEAAITELLVGLNYVWRFEREMTAKALFQCTDNFNGYLSLYKPS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1646 519 Pfam Protein of unknown function (DUF668) 356 443 IPR007700 GO:0045927
Mtr6g1646 519 Coils Coil 177 211 - -
Mtr6g1646 519 PANTHER DUF3475 DOMAIN PROTEIN 290 518 - -
Mtr6g1646 519 PANTHER DUF3475 DOMAIN PROTEIN 1 286 - -
Mtr6g1646 519 Pfam Domain of unknown function (DUF3475) 38 93 IPR021864 GO:0045927
Mtr6g1646 519 PANTHER BNAC09G50660D PROTEIN 1 286 - -
Mtr6g1646 519 PANTHER BNAC09G50660D PROTEIN 290 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1646 Mtr-Chr6 30405918 30407477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1646 - - mtr:MTR_6g461910 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1646 6 30405918 30407477 Mtr6g1646 6 30405918 30407477 ECH
Mtr6g1646 6 30405918 30407477 Mtr1g2692 1 38071301 38073336 PCT