Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2692 ATGGCTCTCGAAACACTCCTCTTCAAGGTCAAAACCGCCATTTCAAACAGCTTCGATTCAGTCCCTCCTAAACTTCTCAAGAAAAAACCTTCCTTCAAATCCAAAAGAAACGTCGCCGTTTTAGCCTTTGAGATCGCTGGTGTTATGTCAAAGCTTCTTCATCTATTTCAGTCACTTTCCGATGCAACAATTGTTCGTATTCGAAACGACGCCGTTACCCTTGAAGGCGTTCGTAAAATCATCTCCAACGATGAATCTTTTCTGTTAGGACTCGCTTGTGCTGAGTTCACTGAGACTCTTCGTCTTGTTGCGAACTCGGTCACAAGACTCAGTCAGCGATGTGAGGATGCTAATCTCAGAAACTTCCATCAGGCTTTTTCAGAGTTTGCTGACACGGGCCGTGATTCAAATGGGTGGGTTTTTTCTGGGCCGAAGGAAATTGAAGCTAAGTTTAGAAAAATGGAACGTTACGTGATGCTTACGGCAACTTTACACCGTGAAATGGAAGAGCTTTCTGTTTTAGAAAATGGGTTTAGAAAAGCTTTGAATTTGAATCATCATCATCATCGTAGGAATAGTTGTAGTGAAGGAAATGAAAGTTCTTTTGGTGTTGGAAAAGAGCAGAAAATTTATGAACTTCAGCAGAAGATTTGTTGGCAGAAACAAGAAGTTAAGGATCTGAAAGATAGGTGTTTGTGGAGTAGAAGTTTTGATGGTGTTGTTTTGTTACTTGTGAGGTTTTGTTTCACTGTTTTAGCAAGGATTAAGGTTGTGTTTGGGATTGGTCATTCCATGCCTTGTTTGTCAGCAACTTCTGCAGCAGTTTATCCATCTGATCAGAATCCAAATTCTTGTCATGAATTCGTTTCTGGGTCATTGGAAAGCCCAGAGCTTGATGTGATCAAGGATGGTTTAGGATTGGGAACTGGGTTTTTTGAGTCAAATTCAAAGCTTTTGAAACCACCTCCTAGTACTTTAGGTGCTTCAGCTTTGGCTTTACACTATGCAAATTTGATCATAGTGTTGGAAAAGATGATAAAGACACCTCATTTGATTGGTTTAGATGCAAGGGATGATTTGTATGGTATGTTACCTAGTAGCATAAGGTCAGGTTTAAGGGCTAGGTTGAAAGGAATTGGTTTTTGTGCAAGTGATCCTGTTCTTGCTGGTGAATGGAAAGATGCTTTGGGGAGGATATTGGGATGGTTGTCACCTTTGGCACATAACATGATCAAGTGGCAAAGTGAAAGAAGCTTTGAGCAGCAAAATTTGGTCCCTAAGACCAATGTTTTGCTTTTGCAGACTTTGTTTTTTGCAAACAAAGAGAAGACTGAAGCTGCCATAACTGAGTTGCTTGTTGGGTTGAATTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAAGCTTTGTTTGAATGTGCCAATTTCAATGGTTTTATTAAATCTGCAAAATCATAG 1458 0.3999 MALETLLFKVKTAISNSFDSVPPKLLKKKPSFKSKRNVAVLAFEIAGVMSKLLHLFQSLSDATIVRIRNDAVTLEGVRKIISNDESFLLGLACAEFTETLRLVANSVTRLSQRCEDANLRNFHQAFSEFADTGRDSNGWVFSGPKEIEAKFRKMERYVMLTATLHREMEELSVLENGFRKALNLNHHHHRRNSCSEGNESSFGVGKEQKIYELQQKICWQKQEVKDLKDRCLWSRSFDGVVLLLVRFCFTVLARIKVVFGIGHSMPCLSATSAAVYPSDQNPNSCHEFVSGSLESPELDVIKDGLGLGTGFFESNSKLLKPPPSTLGASALALHYANLIIVLEKMIKTPHLIGLDARDDLYGMLPSSIRSGLRARLKGIGFCASDPVLAGEWKDALGRILGWLSPLAHNMIKWQSERSFEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYIWRFEREMTAKALFECANFNGFIKSAKS* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2692 485 Pfam Protein of unknown function (DUF668) 325 412 IPR007700 GO:0045927
Mtr1g2692 485 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Mtr1g2692 485 PANTHER BNAC09G50660D PROTEIN 1 477 - -
Mtr1g2692 485 PANTHER SIMILARITY TO UNKNOWN PROTEIN 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2692 Mtr-Chr1 38071301 38073336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2692 - - mtr:MTR_0318s0020 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1646 6 30405918 30407477 Mtr1g2692 1 38071301 38073336 PCT