Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1576 ATGGCTATAGAGTGCATAACAAGTACAAAAGCTATGACTCAATCACCAAAACAAAACCATGGTAAAAATGAAGATGAAGAATCATCATTAGTTTTTGATGCTTCATTTCTAAGACACACCATTAACCTTCCAAAACAATTCATTTGGCCAGATGAAGAAAAACCATGCATGAATGTACCTGAACTTGATGTTCCACTCATTGATTTAAAAAATTTCCTTTCTGGTGACCCTTTTGCTGCAATGGAAGCTTCAAAAATCATTGGTGAAGCATGTGAAAAACATGGTTTTTTTCTTGTTGTTAATCATGGTATTGATGCTAAATTAATAGAACATGCTCATAGTTACATGGATGGTTTCTTTGAGAATCCCCTGTCTCAAAAACAGAGAGCACAGAGGAAAATAGGAGAACATTGTGGTTATGCTAGTAGTTTCACTGGAAGATTCTCCTCAAAACTTCCATGGAAAGAAACACTTTCTTTTCAATTTTCAGATGAGAAAAACTCACCAAATATTGTTAAAGACTACCTTTGCAACACATTAGGGGAAGATTTTGAGGAATTTGGGGAGGTTTACCAAAAGTATTGTGAAGCAATGAGTACACTTTCTTTGGGGATAATGGAGCTTCTTGGAATGAGTCTTGGAGTTGGAAAAGATTGTTTTAGAGATTTTTTTGAAGAGAATAAATCAATAATGAGACTTAATTATTACCCACCATGTCAAAAACCTGATCTCACTTTAGGAACTGGACCTCATTGTGATCCAACATCTTTAACCATTCTACACCAAGACCAAGTTGGTGGCTTGCAAGTTTTTGTTGACAATGAGTGGCATTCCATTAGGCCAAATTTCAATGCTTTTGTTGTCAATATTGGTGACACTTTCATGGCTCTTTCAAATGGGAGATACAAGAGTTGTTTACATAGGGCAGTGGTGAACAACAAGACAACAAGAAAATCTCTAGCTTTCTTTTTGTGTCCAAAAGGTGATAAGGTGGTTTGTCCACCAAGTGAATTGGTGAGTGATTTGACACCAAGAATCTATCCTGATTTTACATGGCCTATGCTTCTTGAGTTCACTCAAAAATATTATAGAGCTGATATGAGAACACTTGAGGCTTTTACAAAATGGATCCAACAAAAAAGTAGCTGA 1149 0.3586 MAIECITSTKAMTQSPKQNHGKNEDEESSLVFDASFLRHTINLPKQFIWPDEEKPCMNVPELDVPLIDLKNFLSGDPFAAMEASKIIGEACEKHGFFLVVNHGIDAKLIEHAHSYMDGFFENPLSQKQRAQRKIGEHCGYASSFTGRFSSKLPWKETLSFQFSDEKNSPNIVKDYLCNTLGEDFEEFGEVYQKYCEAMSTLSLGIMELLGMSLGVGKDCFRDFFEENKSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSIRPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNNKTTRKSLAFFLCPKGDKVVCPPSELVSDLTPRIYPDFTWPMLLEFTQKYYRADMRTLEAFTKWIQQKSS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1576 382 PRINTS Isopenicillin N synthase signature 87 104 - -
Mtr6g1576 382 PRINTS Isopenicillin N synthase signature 251 272 - -
Mtr6g1576 382 PRINTS Isopenicillin N synthase signature 286 312 - -
Mtr6g1576 382 SUPERFAMILY Clavaminate synthase-like 40 366 - -
Mtr6g1576 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 169 IPR026992 -
Mtr6g1576 382 Gene3D - 36 363 IPR027443 -
Mtr6g1576 382 MobiDBLite consensus disorder prediction 1 25 - -
Mtr6g1576 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 379 - -
Mtr6g1576 382 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 19 379 - -
Mtr6g1576 382 Pfam 2OG-Fe(II) oxygenase superfamily 229 326 IPR044861 -
Mtr6g1576 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 227 326 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1576 Mtr-Chr6 28201399 28203335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1576 43 367 Glycosyltransferase AT5G59530 28.869 2.27e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1576 K05282 - gmx:100305378 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1576 6 28201399 28203335 Mtr6g1576 6 28201399 28203335 ECH
Mtr6g1576 6 28201399 28203335 Mtr1g3817 1 49747647 49750240 PCT